Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZSV entry

There are 4 chains in PDB entry 1ZSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ALA 329
B
SER 2ALA 329
C
SER 2ALA 329
D
SER 2ALA 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 1ZSV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
48 54Right-handed alpha
Helix 3
3
A
55 57Right-handed 310
Helix 4
4
A
114 120Right-handed 310
Helix 5
5
A
123 136Right-handed alpha
Helix 6
6
A
154 164Right-handed alpha
Helix 7
7
A
175 185Right-handed alpha
Helix 8
8
A
198 207Right-handed alpha
Helix 9
9
A
219 228Right-handed alpha
Helix 10
10
A
241 245Right-handed 310
Helix 11
11
A
256 263Right-handed alpha
Helix 12
12
A
271 275Right-handed 310
Helix 13
13
A
276 293Right-handed alpha
Helix 14
14
A
308 318Right-handed alpha
Helix 15
15
B
18 20Right-handed 310
Helix 16
16
B
48 54Right-handed alpha
Helix 17
17
B
55 57Right-handed 310
Helix 18
18
B
114 120Right-handed 310
Helix 19
19
B
123 135Right-handed alpha
Helix 20
20
B
154 165Right-handed alpha
Helix 21
21
B
175 185Right-handed alpha
Helix 22
22
B
198 207Right-handed alpha
Helix 23
23
B
219 228Right-handed alpha
Helix 24
24
B
241 245Right-handed 310
Helix 25
25
B
256 263Right-handed alpha
Helix 26
26
B
271 275Right-handed 310
Helix 27
27
B
276 293Right-handed alpha
Helix 28
28
B
308 318Right-handed alpha
Helix 29
29
C
18 20Right-handed 310
Helix 30
30
C
48 54Right-handed alpha
Helix 31
31
C
55 57Right-handed 310
Helix 32
32
C
114 120Right-handed 310
Helix 33
33
C
123 135Right-handed alpha
Helix 34
34
C
152 165Right-handed alpha
Helix 35
35
C
175 185Right-handed alpha
Helix 36
36
C
198 207Right-handed alpha
Helix 37
37
C
219 228Right-handed alpha
Helix 38
38
C
241 245Right-handed 310
Helix 39
39
C
256 263Right-handed alpha
Helix 40
40
C
271 275Right-handed 310
Helix 41
41
C
276 293Right-handed alpha
Helix 42
42
C
308 319Right-handed alpha
Helix 43
43
D
18 20Right-handed 310
Helix 44
44
D
48 54Right-handed alpha
Helix 45
45
D
55 57Right-handed 310
Helix 46
46
D
114 120Right-handed 310
Helix 47
47
D
123 135Right-handed alpha
Helix 48
48
D
154 164Right-handed alpha
Helix 49
49
D
175 185Right-handed alpha
Helix 50
50
D
198 207Right-handed alpha
Helix 51
51
D
219 228Right-handed alpha
Helix 52
52
D
256 263Right-handed alpha
Helix 53
53
D
271 275Right-handed 310
Helix 54
54
D
276 293Right-handed alpha
Helix 55
55
D
308 318Right-handed alpha
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There are 14 sheets in PDB entry 1ZSV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 9first strand
Strand 2
A
22 28anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
94 97first strand
Strand 2
A
37 45anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
84 87anti-parallel
Strand 5
A
103 104anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
94 97first strand
Strand 2
A
37 45anti-parallel
Strand 3
A
324 328anti-parallel
Strand 4
A
300 304parallel
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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 192first strand
Strand 2
A
168 173parallel
Strand 3
A
144 147parallel
Strand 4
A
211 216parallel
Strand 5
A
230 238parallel
Strand 6
A
266 269parallel
Strand 7
B
266 269anti-parallel
Strand 8
B
230 238parallel
Strand 9
B
211 216parallel
Strand 10
B
144 147parallel
Strand 11
B
168 173parallel
Strand 12
B
189 192parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 9first strand
Strand 2
B
22 28anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
94 97first strand
Strand 2
B
37 45anti-parallel
Strand 3
B
67 74anti-parallel
Strand 4
B
84 87anti-parallel
Strand 5
B
103 104anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
94 97first strand
Strand 2
B
37 45anti-parallel
Strand 3
B
324 328anti-parallel
Strand 4
B
300 304parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 9first strand
Strand 2
C
22 28anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
94 97first strand
Strand 2
C
37 45anti-parallel
Strand 3
C
67 74anti-parallel
Strand 4
C
84 87anti-parallel
Strand 5
C
103 104anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
94 97first strand
Strand 2
C
37 45anti-parallel
Strand 3
C
324 328anti-parallel
Strand 4
C
300 304parallel
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There are 12 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
189 192first strand
Strand 2
C
168 173parallel
Strand 3
C
144 147parallel
Strand 4
C
211 216parallel
Strand 5
C
230 238parallel
Strand 6
C
266 269parallel
Strand 7
D
266 269anti-parallel
Strand 8
D
230 238parallel
Strand 9
D
211 216parallel
Strand 10
D
144 147parallel
Strand 11
D
168 173parallel
Strand 12
D
189 192parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 9first strand
Strand 2
D
22 28anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
94 97first strand
Strand 2
D
37 45anti-parallel
Strand 3
D
67 74anti-parallel
Strand 4
D
84 87anti-parallel
Strand 5
D
103 104anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
94 97first strand
Strand 2
D
37 45anti-parallel
Strand 3
D
324 328anti-parallel
Strand 4
D
300 304parallel
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