Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZSW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZSW entry

There is 1 chain in PDB entry 1ZSW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL -13LYS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1ZSW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
87 101Right-handed alpha
Helix 3
3
A
149 153Right-handed 310
Helix 4
4
A
166 177Right-handed alpha
Helix 5
5
A
229 243Right-handed alpha
Helix 6
6
A
283 287Right-handed 310
Helix 7
7
A
294 299Right-handed 310
Helix 8
8
A
300 307Right-handed alpha
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There are 3 sheets in PDB entry 1ZSW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 38first strand
Strand 2
A
41 50anti-parallel
Strand 3
A
59 64anti-parallel
Strand 4
A
7 14parallel
Strand 5
A
220 227anti-parallel
Strand 6
A
268 273parallel
Strand 7
A
257 262anti-parallel
Strand 8
A
251 252anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
114 120anti-parallel
Strand 3
A
109 111anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
114 120anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
77 85parallel
Strand 5
A
156 164anti-parallel
Strand 6
A
203 207parallel
Strand 7
A
189 193anti-parallel
Strand 8
A
181 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il