Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZSY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZSY entry

There is 1 chain in PDB entry 1ZSY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11MET 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1ZSY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 41Right-handed alpha
Helix 2
2
A
67 76Right-handed alpha
Helix 3
3
A
141 148Right-handed alpha
Helix 4
4
A
150 162Right-handed alpha
Helix 5
5
A
178 192Right-handed alpha
Helix 6
6
A
204 215Right-handed alpha
Helix 7
7
A
223 228Right-handed alpha
Helix 8
8
A
229 234Right-handed 310
Helix 9
9
A
249 258Right-handed alpha
Helix 10
10
A
280 287Right-handed alpha
Helix 11
11
A
295 303Right-handed alpha
Helix 12
12
A
304 321Right-handed alpha
Helix 13
13
A
336 345Right-handed alpha
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There are 4 sheets in PDB entry 1ZSY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
27 32anti-parallel
Strand 3
A
86 87anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
56 65anti-parallel
Strand 3
A
93 99anti-parallel
Strand 4
A
111 114anti-parallel
Strand 5
A
133 136anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
56 65anti-parallel
Strand 3
A
352 356anti-parallel
Strand 4
A
329 333parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
194 199parallel
Strand 3
A
170 173parallel
Strand 4
A
243 246parallel
Strand 5
A
265 268parallel
Strand 6
A
290 293parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il