Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZUO entry

There are 2 chains in PDB entry 1ZUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 201HIS 362
B
 GLY 201GLY 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1ZUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
202 219Right-handed alpha
Helix 2
2
A
219 224Right-handed alpha
Helix 3
3
A
250 264Right-handed alpha
Helix 4
4
A
298 302Right-handed 310
Helix 5
5
A
305 309Right-handed 310
Helix 6
6
A
318 333Right-handed alpha
Helix 7
7
A
347 362Right-handed alpha
Helix 8
8
B
202 218Right-handed alpha
Helix 9
9
B
219 224Right-handed alpha
Helix 10
10
B
250 264Right-handed alpha
Helix 11
11
B
298 302Right-handed 310
Helix 12
12
B
305 309Right-handed 310
Helix 13
13
B
318 333Right-handed alpha
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There are 4 sheets in PDB entry 1ZUO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 232first strand
Strand 2
A
235 243anti-parallel
Strand 3
A
268 273anti-parallel
Strand 4
A
284 289anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
336 337anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 232first strand
Strand 2
B
235 243anti-parallel
Strand 3
B
268 273anti-parallel
Strand 4
B
284 289anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 293first strand
Strand 2
B
336 337anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il