Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZVU entry

There is 1 chain in PDB entry 1ZVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 28ASP 740
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1ZVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 50Right-handed alpha
Helix 2
2
A
66 72Right-handed alpha
Helix 3
3
A
79 90Right-handed alpha
Helix 4
4
A
119 121Right-handed 310
Helix 5
5
A
129 134Right-handed alpha
Helix 6
6
A
162 168Right-handed alpha
Helix 7
7
A
184 198Right-handed alpha
Helix 8
8
A
202 207Right-handed alpha
Helix 9
9
A
226 235Right-handed alpha
Helix 10
10
A
262 276Right-handed alpha
Helix 11
11
A
307 319Right-handed alpha
Helix 12
12
A
342 385Right-handed alpha
Helix 13
13
A
385 396Right-handed alpha
Helix 14
14
A
398 406Right-handed alpha
Helix 15
15
A
412 419Right-handed alpha
Helix 16
16
A
421 425Right-handed 310
Helix 17
17
A
426 453Right-handed alpha
Helix 18
18
A
453 473Right-handed alpha
Helix 19
19
A
609 612Right-handed 310
Helix 20
20
A
675 681Right-handed alpha
Helix 21
21
A
710 715Right-handed alpha
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There are 10 sheets in PDB entry 1ZVU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
123 125anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
152 154anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
236 242anti-parallel
Strand 3
A
322 328anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 248first strand
Strand 2
A
251 256anti-parallel
Strand 3
A
297 301anti-parallel
Strand 4
A
282 287anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 332first strand
Strand 2
A
338 340anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 512first strand
Strand 2
A
502 505anti-parallel
Strand 3
A
533 535anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 586first strand
Strand 2
A
543 547anti-parallel
Strand 3
A
551 555anti-parallel
Strand 4
A
619 620anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 635first strand
Strand 2
A
593 597anti-parallel
Strand 3
A
602 607anti-parallel
Strand 4
A
669 670anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 692first strand
Strand 2
A
642 647anti-parallel
Strand 3
A
651 656anti-parallel
Strand 4
A
726 727anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 709first strand
Strand 2
A
697 702anti-parallel
Strand 3
A
736 740anti-parallel
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