Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZYZ entry

There are 2 chains in PDB entry 1ZYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 15VAL 796
B
 PHE 15VAL 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 1ZYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 24Right-handed alpha
Helix 2
2
A
35 42Right-handed alpha
Helix 3
3
A
52 67Right-handed alpha
Helix 4
4
A
72 89Right-handed alpha
Helix 5
5
A
93 104Right-handed alpha
Helix 6
6
A
117 127Right-handed alpha
Helix 7
7
A
127 133Right-handed alpha
Helix 8
8
A
136 143Right-handed 310
Helix 9
9
A
144 155Right-handed alpha
Helix 10
10
A
166 180Right-handed alpha
Helix 11
11
A
182 195Right-handed alpha
Helix 12
12
A
201 208Right-handed alpha
Helix 13
13
A
227 244Right-handed alpha
Helix 14
14
A
271 287Right-handed alpha
Helix 15
15
A
307 312Right-handed alpha
Helix 16
16
A
320 324Right-handed 310
Helix 17
17
A
335 344Right-handed alpha
Helix 18
18
A
358 362Right-handed 310
Helix 19
19
A
363 377Right-handed alpha
Helix 20
20
A
385 400Right-handed alpha
Helix 21
21
A
407 413Right-handed alpha
Helix 22
22
A
416 420Right-handed 310
Helix 23
23
A
466 488Right-handed alpha
Helix 24
24
A
492 503Right-handed alpha
Helix 25
25
A
511 519Right-handed alpha
Helix 26
26
A
525 555Right-handed alpha
Helix 27
27
A
570 575Right-handed alpha
Helix 28
28
A
584 596Right-handed alpha
Helix 29
29
A
608 616Right-handed alpha
Helix 30
30
A
642 652Right-handed alpha
Helix 31
31
A
658 666Right-handed alpha
Helix 32
32
A
677 684Right-handed alpha
Helix 33
33
A
686 690Right-handed 310
Helix 34
34
A
691 704Right-handed alpha
Helix 35
35
A
722 734Right-handed alpha
Helix 36
36
A
759 764Right-handed alpha
Helix 37
37
A
765 767Right-handed 310
Helix 38
38
B
19 26Right-handed alpha
Helix 39
39
B
30 34Right-handed 310
Helix 40
40
B
37 43Right-handed alpha
Helix 41
41
B
54 67Right-handed alpha
Helix 42
42
B
72 90Right-handed alpha
Helix 43
43
B
93 104Right-handed alpha
Helix 44
44
B
117 127Right-handed alpha
Helix 45
45
B
127 135Right-handed alpha
Helix 46
46
B
136 142Right-handed 310
Helix 47
47
B
144 155Right-handed alpha
Helix 48
48
B
166 179Right-handed alpha
Helix 49
49
B
182 195Right-handed alpha
Helix 50
50
B
201 208Right-handed alpha
Helix 51
51
B
227 244Right-handed alpha
Helix 52
52
B
271 287Right-handed alpha
Helix 53
53
B
307 312Right-handed alpha
Helix 54
54
B
335 344Right-handed alpha
Helix 55
55
B
358 362Right-handed 310
Helix 56
56
B
363 377Right-handed alpha
Helix 57
57
B
385 400Right-handed alpha
Helix 58
58
B
407 413Right-handed alpha
Helix 59
59
B
416 420Right-handed 310
Helix 60
60
B
466 488Right-handed alpha
Helix 61
61
B
492 503Right-handed alpha
Helix 62
62
B
511 519Right-handed alpha
Helix 63
63
B
525 555Right-handed alpha
Helix 64
64
B
564 568Right-handed 310
Helix 65
65
B
570 575Right-handed alpha
Helix 66
66
B
584 596Right-handed alpha
Helix 67
67
B
610 616Right-handed alpha
Helix 68
68
B
642 652Right-handed alpha
Helix 69
69
B
658 666Right-handed alpha
Helix 70
70
B
677 684Right-handed alpha
Helix 71
71
B
691 703Right-handed alpha
Helix 72
72
B
704 706Right-handed 310
Helix 73
73
B
722 734Right-handed alpha
Helix 74
74
B
747 758Right-handed alpha
Helix 75
75
B
787 792Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 1ZYZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
445 449anti-parallel
Strand 3
A
506 510parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 443first strand
Strand 2
A
218 222anti-parallel
Strand 3
A
247 251parallel
Strand 4
A
297 301parallel
Strand 5
A
328 334parallel
Strand 6
A
403 406parallel
Strand 7
A
738 740anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
381 384anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 456first strand
Strand 2
A
462 465anti-parallel
Strand 3
A
778 779parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 631first strand
Strand 2
A
638 641anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
714 716first strand
Strand 2
A
743 745parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 200first strand
Strand 2
B
445 449anti-parallel
Strand 3
B
506 510parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
441 443first strand
Strand 2
B
218 222anti-parallel
Strand 3
B
247 251parallel
Strand 4
B
297 301parallel
Strand 5
B
328 334parallel
Strand 6
B
403 406parallel
Strand 7
B
738 740anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
381 384anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 456first strand
Strand 2
B
462 465anti-parallel
Strand 3
B
778 779parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
628 629first strand
Strand 2
B
640 641anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
714 716first strand
Strand 2
B
743 745parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il