Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZZM entry

There is 1 chain in PDB entry 1ZZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1PRO 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 1ZZM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 31Right-handed alpha
Helix 2
2
A
42 44Right-handed 310
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
66 73Right-handed 310
Helix 5
5
A
74 88Right-handed alpha
Helix 6
6
A
108 126Right-handed alpha
Helix 7
7
A
137 149Right-handed alpha
Helix 8
8
A
162 172Right-handed alpha
Helix 9
9
A
179 184Right-handed 310
Helix 10
10
A
189 197Right-handed alpha
Helix 11
11
A
198 200Right-handed 310
Helix 12
12
A
222 224Right-handed 310
Helix 13
13
A
225 237Right-handed alpha
Helix 14
14
A
240 257Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1ZZM.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 7first strand
Strand 2
A
33 39parallel
Strand 3
A
59 63parallel
Strand 4
A
92 101parallel
Strand 5
A
130 135parallel
Strand 6
A
154 156parallel
Strand 7
A
175 178parallel
Strand 8
A
202 204parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il