Analysis of interatomic Contacts of Structural Units in PDB entry:
216L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 216L entry

There are 2 chains in PDB entry 216L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 162
B
 MET 1LEU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 216L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
3 11Right-handed alpha
Helix 2
H2
A
39 50Right-handed alpha
Helix 3
H3
A
60 80Right-handed alpha
Helix 4
H4
A
82 90Right-handed alpha
Helix 5
H5
A
93 106Right-handed alpha
Helix 6
H6
A
108 113Right-handed alpha
Helix 7
H7
A
115 123Right-handed alpha
Helix 8
H8
A
126 134Right-handed alpha
Helix 9
H9
A
137 141Right-handed alpha
Helix 10
H10
A
143 155Right-handed alpha
Helix 11
H11
B
3 11Right-handed alpha
Helix 12
H12
B
39 50Right-handed alpha
Helix 13
H13
B
60 80Right-handed alpha
Helix 14
H14
B
82 90Right-handed alpha
Helix 15
H15
B
93 106Right-handed alpha
Helix 16
H16
B
108 113Right-handed alpha
Helix 17
H17
B
115 123Right-handed alpha
Helix 18
H18
B
126 134Right-handed alpha
Helix 19
H19
B
137 141Right-handed alpha
Helix 20
H20
B
143 155Right-handed alpha
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There are 2 sheets in PDB entry 216L. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
24 27anti-parallel
Strand 3
A
31 32anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 19first strand
Strand 2
B
25 28anti-parallel
Strand 3
B
31 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il