Analysis of interatomic Contacts of Structural Units in PDB entry:
21FJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 21FJ entry

There is 1 chain in PDB entry 21FJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 5GLN 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 21FJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
8 28Right-handed alpha
Helix 2
AA2
A
28 47Right-handed alpha
Helix 3
AA3
A
48 67Right-handed alpha
Helix 4
AA4
A
68 73Right-handed 310
Helix 5
AA5
A
85 96Right-handed alpha
Helix 6
AA6
A
97 109Right-handed alpha
Helix 7
AA7
A
109 114Right-handed alpha
Helix 8
AA8
A
127 140Right-handed alpha
Helix 9
AA9
A
141 150Right-handed alpha
Helix 10
AB1
A
151 161Right-handed alpha
Helix 11
AB2
A
168 173Right-handed alpha
Helix 12
AB3
A
173 178Right-handed alpha
Helix 13
AB4
A
179 183Right-handed 310
Helix 14
AB5
A
194 199Right-handed alpha
Helix 15
AB6
A
203 220Right-handed alpha
Helix 16
AB7
A
225 247Right-handed alpha
Helix 17
AB8
A
252 274Right-handed alpha
Helix 18
AB9
A
275 293Right-handed alpha
Helix 19
AC1
A
293 299Right-handed alpha
Helix 20
AC2
A
308 313Right-handed alpha
Helix 21
AC3
A
313 324Right-handed alpha
Helix 22
AC4
A
324 335Right-handed alpha
Helix 23
AC5
A
340 373Right-handed alpha
Helix 24
AC6
A
377 383Right-handed alpha
Helix 25
AC7
A
386 396Right-handed alpha
Helix 26
AC8
A
400 431Right-handed alpha
Helix 27
AC9
A
442 451Right-handed alpha
Helix 28
AD1
A
454 464Right-handed alpha
Helix 29
AD2
A
466 478Right-handed alpha
Helix 30
AD3
A
482 499Right-handed alpha
Back to top of page
There are no sheets in PDB entry 21FJ

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il