Analysis of interatomic Contacts of Structural Units in PDB entry:
22AJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22AJ entry

There are 2 chains in PDB entry 22AJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1THR 429
A
 MET 1SER 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 22AJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
10 29Right-handed alpha
Helix 2
AA2
B
40 46Right-handed alpha
Helix 3
AA3
B
47 49Right-handed 310
Helix 4
AA4
B
55 57Right-handed 310
Helix 5
AA5
B
70 78Right-handed alpha
Helix 6
AA6
B
81 85Right-handed 310
Helix 7
AA7
B
86 88Right-handed 310
Helix 8
AA8
B
100 106Right-handed alpha
Helix 9
AA9
B
112 127Right-handed alpha
Helix 10
AB1
B
142 159Right-handed alpha
Helix 11
AB2
B
180 193Right-handed alpha
Helix 12
AB3
B
203 214Right-handed alpha
Helix 13
AB4
B
221 238Right-handed alpha
Helix 14
AB5
B
239 241Right-handed 310
Helix 15
AB6
B
249 258Right-handed alpha
Helix 16
AB7
B
278 282Right-handed 310
Helix 17
AB8
B
285 294Right-handed alpha
Helix 18
AB9
B
295 299Right-handed 310
Helix 19
AC1
B
304 308Right-handed 310
Helix 20
AC2
B
322 337Right-handed alpha
Helix 21
AC3
B
338 341Right-handed 310
Helix 22
AC4
B
373 391Right-handed alpha
Helix 23
AC5
B
394 400Right-handed alpha
Helix 24
AC6
B
404 425Right-handed alpha
Helix 25
AC7
A
10 29Right-handed alpha
Helix 26
AC8
A
48 51Right-handed 310
Helix 27
AC9
A
72 80Right-handed alpha
Helix 28
AD1
A
88 90Right-handed 310
Helix 29
AD2
A
102 108Right-handed alpha
Helix 30
AD3
A
114 128Right-handed alpha
Helix 31
AD4
A
143 161Right-handed alpha
Helix 32
AD5
A
182 194Right-handed alpha
Helix 33
AD6
A
205 216Right-handed alpha
Helix 34
AD7
A
223 239Right-handed alpha
Helix 35
AD8
A
240 243Right-handed 310
Helix 36
AD9
A
251 260Right-handed alpha
Helix 37
AE1
A
280 284Right-handed 310
Helix 38
AE2
A
287 296Right-handed alpha
Helix 39
AE3
A
297 301Right-handed 310
Helix 40
AE4
A
306 310Right-handed 310
Helix 41
AE5
A
324 336Right-handed alpha
Helix 42
AE6
A
338 343Right-handed 310
Helix 43
AE7
A
383 401Right-handed alpha
Helix 44
AE8
A
404 410Right-handed alpha
Helix 45
AE9
A
415 436Right-handed alpha
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There are 5 sheets in PDB entry 22AJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
63 67parallel
Strand 3
B
2 9parallel
Strand 4
B
129 138parallel
Strand 5
B
163 169parallel
Strand 6
B
198 202parallel
Strand 7
B
265 271parallel
Strand 8
B
364 371anti-parallel
Strand 9
B
310 318anti-parallel
Strand 10
B
349 354parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
59 61anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
65 69parallel
Strand 3
A
2 9parallel
Strand 4
A
131 140parallel
Strand 5
A
165 171parallel
Strand 6
A
200 204parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
60 63anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
373 381anti-parallel
Strand 3
A
312 321anti-parallel
Strand 4
A
351 356parallel
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