Analysis of interatomic Contacts of Structural Units in PDB entry:
22DZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 22DZ entry

There are 3 chains in PDB entry 22DZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	THR 803	GLN 1084
F	CYS 339	GLY 716
C	TYR 18	GLN 1085

There are 32 helices in PDB entry 22DZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	805	811	Right-handed alpha
Helix 2	AA2	H	814	825	Right-handed alpha
Helix 3	AA3	H	828	834	Right-handed alpha
Helix 4	AA4	H	910	915	Right-handed 310
Helix 5	AA5	H	926	931	Right-handed alpha
Helix 6	AA6	H	1032	1038	Right-handed alpha
Helix 7	AA7	H	1050	1058	Right-handed alpha
Helix 8	AA8	H	1059	1084	Right-handed alpha
Helix 9	AA9	F	345	352	Right-handed alpha
Helix 10	AB1	F	385	390	Right-handed alpha
Helix 11	AB2	F	410	415	Right-handed alpha
Helix 12	AB3	F	678	682	Right-handed 310
Helix 13	AB4	F	693	699	Right-handed alpha
Helix 14	AB5	C	37	41	Right-handed 310
Helix 15	AB6	C	49	53	Right-handed 310
Helix 16	AB7	C	222	231	Right-handed alpha
Helix 17	AB8	C	345	352	Right-handed alpha
Helix 18	AB9	C	386	390	Right-handed 310
Helix 19	AC1	C	410	415	Right-handed alpha
Helix 20	AC2	C	429	433	Right-handed 310
Helix 21	AC3	C	451	456	Right-handed 310
Helix 22	AC4	C	595	599	Right-handed 310
Helix 23	AC5	C	693	698	Right-handed alpha
Helix 24	AC6	C	814	822	Right-handed alpha
Helix 25	AC7	C	826	836	Right-handed alpha
Helix 26	AC8	C	908	913	Right-handed alpha
Helix 27	AC9	C	914	915	Right-handed 310
Helix 28	AD1	C	916	920	Right-handed 310
Helix 29	AD2	C	926	931	Right-handed alpha
Helix 30	AD3	C	1032	1040	Right-handed alpha
Helix 31	AD4	C	1050	1058	Right-handed alpha
Helix 32	AD5	C	1059	1085	Right-handed alpha

There are 21 sheets in PDB entry 22DZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	361	363	first strand
Strand 2	F	659	661	anti-parallel
Strand 3	F	672	673	anti-parallel
Strand 4	F	714	715	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	373	376	first strand
Strand 2	F	604	608	parallel
Strand 3	F	611	615	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	400	404	first strand
Strand 2	F	440	445	anti-parallel
Strand 3	F	574	576	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	499	500	first strand
Strand 2	F	558	559	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	513	514	first strand
Strand 2	F	505	506	anti-parallel
Strand 3	F	553	554	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	631	632	first strand
Strand 2	F	638	642	anti-parallel
Strand 3	F	648	649	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	100	103	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	325	326	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	76	first strand
Strand 2	C	312	322	anti-parallel
Strand 3	C	83	86	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	76	first strand
Strand 2	C	312	322	anti-parallel
Strand 3	C	115	120	anti-parallel
Strand 4	C	252	259	anti-parallel
Strand 5	C	262	267	anti-parallel
Strand 6	C	279	284	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	292	296	anti-parallel
Strand 3	C	146	150	anti-parallel
Strand 4	C	168	172	anti-parallel
Strand 5	C	179	189	anti-parallel
Strand 6	C	232	235	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	292	296	anti-parallel
Strand 3	C	146	150	anti-parallel
Strand 4	C	168	172	anti-parallel
Strand 5	C	179	189	anti-parallel
Strand 6	C	242	244	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	129	first strand
Strand 2	C	137	141	anti-parallel
Strand 3	C	309	310	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	155	first strand
Strand 2	C	161	164	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	208	first strand
Strand 2	C	298	300	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	420	422	first strand
Strand 2	C	481	482	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	442	first strand
Strand 2	C	574	576	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	514	first strand
Strand 2	C	504	506	anti-parallel
Strand 3	C	553	555	anti-parallel
Strand 4	C	543	544	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	604	608	first strand
Strand 2	C	611	615	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	641	642	first strand
Strand 2	C	648	649	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	803	804	first strand
Strand 2	C	932	933	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 22DZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
22DZ