Analysis of interatomic Contacts of Structural Units in PDB entry:
22GF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22GF entry

There are 3 chains in PDB entry 22GF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 248LEU 363
B
 MET 248HIS 365
C
 MET 248LEU 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 22GF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
257 259Right-handed 310
Helix 2
AA2
A
312 320Right-handed alpha
Helix 3
AA3
A
333 338Right-handed 310
Helix 4
AA4
A
339 343Right-handed 310
Helix 5
AA5
B
257 259Right-handed 310
Helix 6
AA6
B
312 320Right-handed alpha
Helix 7
AA7
B
333 337Right-handed 310
Helix 8
AA8
C
257 259Right-handed 310
Helix 9
AA9
C
312 320Right-handed alpha
Helix 10
AB1
C
333 337Right-handed 310
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There are 6 sheets in PDB entry 22GF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
327 332anti-parallel
Strand 4
A
352 361anti-parallel
Strand 5
A
278 286anti-parallel
Strand 6
A
292 296anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
327 332anti-parallel
Strand 4
A
352 361anti-parallel
Strand 5
A
278 286anti-parallel
Strand 6
A
302 305anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 255first strand
Strand 2
B
261 266anti-parallel
Strand 3
B
327 332anti-parallel
Strand 4
B
352 361anti-parallel
Strand 5
B
278 287anti-parallel
Strand 6
B
292 296anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 255first strand
Strand 2
B
261 266anti-parallel
Strand 3
B
327 332anti-parallel
Strand 4
B
352 361anti-parallel
Strand 5
B
278 287anti-parallel
Strand 6
B
302 305anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
254 255first strand
Strand 2
C
261 266anti-parallel
Strand 3
C
327 332anti-parallel
Strand 4
C
352 361anti-parallel
Strand 5
C
278 287anti-parallel
Strand 6
C
292 296anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
254 255first strand
Strand 2
C
261 266anti-parallel
Strand 3
C
327 332anti-parallel
Strand 4
C
352 361anti-parallel
Strand 5
C
278 287anti-parallel
Strand 6
C
302 305anti-parallel
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