Analysis of interatomic Contacts of Structural Units in PDB entry:
22GV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22GV entry

There are 2 chains in PDB entry 22GV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 18ASN 282
B
 GLU 19LEU 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 22GV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
160 165Right-handed alpha
Helix 2
AA2
B
160 165Right-handed alpha
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There are 12 sheets in PDB entry 22GV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 26first strand
Strand 2
A
275 280anti-parallel
Strand 3
A
265 270anti-parallel
Strand 4
A
260 262anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
59 64anti-parallel
Strand 4
A
70 79anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 88first strand
Strand 2
A
91 96anti-parallel
Strand 3
A
99 104anti-parallel
Strand 4
A
110 115anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 129first strand
Strand 2
A
132 137anti-parallel
Strand 3
A
142 147anti-parallel
Strand 4
A
153 158anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 173first strand
Strand 2
A
178 184anti-parallel
Strand 3
A
192 198anti-parallel
Strand 4
A
204 212anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 220first strand
Strand 2
A
223 231anti-parallel
Strand 3
A
234 240anti-parallel
Strand 4
A
246 247anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
275 280anti-parallel
Strand 3
B
265 270anti-parallel
Strand 4
B
260 262anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
41 45anti-parallel
Strand 3
B
59 64anti-parallel
Strand 4
B
70 79anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 88first strand
Strand 2
B
91 96anti-parallel
Strand 3
B
99 104anti-parallel
Strand 4
B
110 115anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 129first strand
Strand 2
B
132 137anti-parallel
Strand 3
B
142 147anti-parallel
Strand 4
B
153 158anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 173first strand
Strand 2
B
178 184anti-parallel
Strand 3
B
192 198anti-parallel
Strand 4
B
204 212anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 220first strand
Strand 2
B
223 228anti-parallel
Strand 3
B
236 240anti-parallel
Strand 4
B
246 247anti-parallel
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