Analysis of interatomic Contacts of Structural Units in PDB entry:
22JX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 22JX entry

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 22JX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 25	PHE 837
A	THR 839	THR 839
A	VAL 842	MET 845
B	ARG 25	PHE 837
B	THR 839	THR 839
B	VAL 842	MET 845
C	GLY 5	ASN 368
D	GLY 5	ASN 368
E	ASP 2	ILE 107
F	VAL 5	VAL 121
G	ASP 2	ILE 107
H	VAL 5	VAL 121

There are 52 helices in PDB entry 22JX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	82	Right-handed alpha
Helix 2	AA2	A	101	115	Right-handed alpha
Helix 3	AA3	A	151	163	Right-handed alpha
Helix 4	AA4	A	177	181	Right-handed 310
Helix 5	AA5	A	194	209	Right-handed alpha
Helix 6	AA6	A	221	238	Right-handed alpha
Helix 7	AA7	A	253	265	Right-handed alpha
Helix 8	AA8	A	266	268	Right-handed 310
Helix 9	AA9	A	279	294	Right-handed alpha
Helix 10	AB1	A	318	322	Right-handed 310
Helix 11	AB2	A	337	342	Right-handed alpha
Helix 12	AB3	A	354	363	Right-handed alpha
Helix 13	AB4	A	396	419	Right-handed alpha
Helix 14	AB5	A	426	430	Right-handed 310
Helix 15	AB6	A	433	442	Right-handed alpha
Helix 16	AB7	A	577	604	Right-handed alpha
Helix 17	AB8	A	614	637	Right-handed alpha
Helix 18	AB9	A	640	673	Right-handed alpha
Helix 19	AC1	A	689	715	Right-handed alpha
Helix 20	AC2	A	737	762	Right-handed alpha
Helix 21	AC3	A	770	795	Right-handed alpha
Helix 22	AC4	A	799	828	Right-handed alpha
Helix 23	AC5	B	65	82	Right-handed alpha
Helix 24	AC6	B	101	113	Right-handed alpha
Helix 25	AC7	B	151	163	Right-handed alpha
Helix 26	AC8	B	176	180	Right-handed 310
Helix 27	AC9	B	194	209	Right-handed alpha
Helix 28	AD1	B	221	237	Right-handed alpha
Helix 29	AD2	B	253	265	Right-handed alpha
Helix 30	AD3	B	266	268	Right-handed 310
Helix 31	AD4	B	279	294	Right-handed alpha
Helix 32	AD5	B	318	322	Right-handed 310
Helix 33	AD6	B	334	343	Right-handed alpha
Helix 34	AD7	B	354	364	Right-handed alpha
Helix 35	AD8	B	396	419	Right-handed alpha
Helix 36	AD9	B	433	443	Right-handed alpha
Helix 37	AE1	B	577	604	Right-handed alpha
Helix 38	AE2	B	607	613	Right-handed alpha
Helix 39	AE3	B	614	636	Right-handed alpha
Helix 40	AE4	B	640	672	Right-handed alpha
Helix 41	AE5	B	689	715	Right-handed alpha
Helix 42	AE6	B	736	762	Right-handed alpha
Helix 43	AE7	B	769	795	Right-handed alpha
Helix 44	AE8	B	798	828	Right-handed alpha
Helix 45	AE9	C	98	109	Right-handed alpha
Helix 46	AF1	C	159	161	Right-handed 310
Helix 47	AF2	D	98	108	Right-handed alpha
Helix 48	AF3	E	80	84	Right-handed 310
Helix 49	AF4	F	90	94	Right-handed 310
Helix 50	AF5	G	80	84	Right-handed 310
Helix 51	AF6	H	65	68	Right-handed 310
Helix 52	AF7	H	90	94	Right-handed 310

There are 36 sheets in PDB entry 22JX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	91	97	anti-parallel
Strand 3	A	35	41	parallel
Strand 4	A	145	147	parallel
Strand 5	A	169	171	parallel
Strand 6	A	188	190	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	248	first strand
Strand 2	A	213	219	parallel
Strand 3	A	273	277	parallel
Strand 4	A	300	302	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	329	first strand
Strand 2	A	466	472	anti-parallel
Strand 3	A	480	488	anti-parallel
Strand 4	A	491	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	447	first strand
Strand 2	A	453	454	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	523	first strand
Strand 2	A	533	536	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	542	first strand
Strand 2	A	550	551	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	558	first strand
Strand 2	A	565	567	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	839	843	first strand
Strand 2	C	6	12	anti-parallel
Strand 3	C	18	22	anti-parallel
Strand 4	C	37	43	anti-parallel
Strand 5	C	112	117	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	91	97	anti-parallel
Strand 3	B	35	41	parallel
Strand 4	B	143	148	parallel
Strand 5	B	169	171	parallel
Strand 6	B	188	190	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	248	first strand
Strand 2	B	213	219	parallel
Strand 3	B	273	277	parallel
Strand 4	B	300	303	parallel
Strand 5	B	325	329	parallel
Strand 6	B	466	473	anti-parallel
Strand 7	B	479	488	anti-parallel
Strand 8	B	491	493	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	446	447	first strand
Strand 2	B	453	454	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	523	first strand
Strand 2	B	533	536	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	542	first strand
Strand 2	B	550	551	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	558	first strand
Strand 2	B	565	567	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	722	first strand
Strand 2	B	730	733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	838	843	first strand
Strand 2	D	6	11	anti-parallel
Strand 3	D	19	22	anti-parallel
Strand 4	D	38	42	anti-parallel
Strand 5	D	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	28	first strand
Strand 2	C	169	171	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	85	first strand
Strand 2	C	53	61	anti-parallel
Strand 3	C	140	150	anti-parallel
Strand 4	C	163	166	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	85	first strand
Strand 2	C	53	61	anti-parallel
Strand 3	C	140	150	anti-parallel
Strand 4	C	127	129	anti-parallel
Strand 5	C	288	290	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	188	first strand
Strand 2	C	197	203	anti-parallel
Strand 3	C	214	220	anti-parallel
Strand 4	C	270	274	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	208	first strand
Strand 2	C	345	351	parallel
Strand 3	C	319	327	anti-parallel
Strand 4	C	231	241	anti-parallel
Strand 5	C	252	258	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	208	first strand
Strand 2	C	345	351	parallel
Strand 3	C	319	327	anti-parallel
Strand 4	C	231	241	anti-parallel
Strand 5	C	246	249	anti-parallel
Strand 6	D	249	252	anti-parallel
Strand 7	D	231	239	anti-parallel
Strand 8	D	319	327	anti-parallel
Strand 9	D	343	351	anti-parallel
Strand 10	D	207	208	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	28	first strand
Strand 2	D	169	171	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	82	85	first strand
Strand 2	D	53	58	anti-parallel
Strand 3	D	145	150	anti-parallel
Strand 4	D	164	166	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	60	62	anti-parallel
Strand 3	D	141	142	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	129	first strand
Strand 2	D	288	290	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	184	first strand
Strand 2	D	197	203	anti-parallel
Strand 3	D	187	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	184	first strand
Strand 2	D	197	203	anti-parallel
Strand 3	D	214	220	anti-parallel
Strand 4	D	268	274	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	20	26	anti-parallel
Strand 3	E	71	76	anti-parallel
Strand 4	E	63	67	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	E	103	106	parallel
Strand 3	E	86	91	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	46	50	anti-parallel
Strand 6	E	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	10	first strand
Strand 2	F	23	26	anti-parallel
Strand 3	F	81	85	anti-parallel
Strand 4	F	72	76	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	63	first strand
Strand 2	F	48	55	anti-parallel
Strand 3	F	35	42	anti-parallel
Strand 4	F	95	103	anti-parallel
Strand 5	F	117	119	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	20	26	anti-parallel
Strand 3	G	71	76	anti-parallel
Strand 4	G	63	68	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	13	first strand
Strand 2	G	103	106	parallel
Strand 3	G	86	91	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	46	50	anti-parallel
Strand 6	G	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	7	10	first strand
Strand 2	H	23	27	anti-parallel
Strand 3	H	81	86	anti-parallel
Strand 4	H	71	76	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	60	63	first strand
Strand 2	H	48	55	anti-parallel
Strand 3	H	35	42	anti-parallel
Strand 4	H	95	103	anti-parallel
Strand 5	H	117	119	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 22JX

Analysis of interatomic Contacts of Structural Units in PDB entry:
22JX