Analysis of interatomic Contacts of Structural Units in PDB entry:
22OW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22OW entry

There are 2 chains in PDB entry 22OW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2LYS 461
B
 VAL 2LYS 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 22OW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 18Right-handed alpha
Helix 2
AA2
A
19 26Right-handed alpha
Helix 3
AA3
A
50 65Right-handed alpha
Helix 4
AA4
A
122 132Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
142 156Right-handed alpha
Helix 7
AA7
A
168 177Right-handed alpha
Helix 8
AA8
A
179 193Right-handed alpha
Helix 9
AA9
A
206 213Right-handed alpha
Helix 10
AB1
A
222 232Right-handed alpha
Helix 11
AB2
A
232 237Right-handed alpha
Helix 12
AB3
A
239 244Right-handed alpha
Helix 13
AB4
A
258 262Right-handed alpha
Helix 14
AB5
A
264 279Right-handed alpha
Helix 15
AB6
A
279 286Right-handed alpha
Helix 16
AB7
A
306 316Right-handed alpha
Helix 17
AB8
A
329 340Right-handed alpha
Helix 18
AB9
A
369 373Right-handed 310
Helix 19
AC1
A
374 389Right-handed alpha
Helix 20
AC2
A
408 421Right-handed alpha
Helix 21
AC3
A
429 440Right-handed alpha
Helix 22
AC4
B
4 18Right-handed alpha
Helix 23
AC5
B
19 25Right-handed alpha
Helix 24
AC6
B
50 63Right-handed alpha
Helix 25
AC7
B
122 134Right-handed alpha
Helix 26
AC8
B
137 156Right-handed alpha
Helix 27
AC9
B
157 162Right-handed alpha
Helix 28
AD1
B
168 177Right-handed alpha
Helix 29
AD2
B
179 193Right-handed alpha
Helix 30
AD3
B
206 214Right-handed alpha
Helix 31
AD4
B
222 232Right-handed alpha
Helix 32
AD5
B
232 237Right-handed alpha
Helix 33
AD6
B
239 247Right-handed alpha
Helix 34
AD7
B
258 262Right-handed alpha
Helix 35
AD8
B
264 279Right-handed alpha
Helix 36
AD9
B
279 286Right-handed alpha
Helix 37
AE1
B
287 289Right-handed 310
Helix 38
AE2
B
291 295Right-handed 310
Helix 39
AE3
B
306 316Right-handed alpha
Helix 40
AE4
B
326 328Right-handed 310
Helix 41
AE5
B
329 340Right-handed alpha
Helix 42
AE6
B
369 373Right-handed 310
Helix 43
AE7
B
374 389Right-handed alpha
Helix 44
AE8
B
408 421Right-handed alpha
Helix 45
AE9
B
429 440Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 22OW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
113 120parallel
Strand 4
A
97 108anti-parallel
Strand 5
A
81 91anti-parallel
Strand 6
A
67 76anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 199first strand
Strand 2
A
202 205anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 322first strand
Strand 2
A
297 301parallel
Strand 3
A
363 367parallel
Strand 4
A
394 399parallel
Strand 5
A
455 460anti-parallel
Strand 6
A
443 449anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 49first strand
Strand 2
B
27 35anti-parallel
Strand 3
B
112 120parallel
Strand 4
B
97 109anti-parallel
Strand 5
B
81 91anti-parallel
Strand 6
B
67 78anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 199first strand
Strand 2
B
202 205anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 350first strand
Strand 2
B
320 325parallel
Strand 3
B
297 301parallel
Strand 4
B
363 367parallel
Strand 5
B
394 400parallel
Strand 6
B
454 460anti-parallel
Strand 7
B
445 451anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il