Analysis of interatomic Contacts of Structural Units in PDB entry:
22RJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 22RJ entry

There are 8 chains in PDB entry 22RJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 103	THR 573
B	LYS 103	THR 573
C	LYS 103	THR 573
D	LYS 103	THR 573
E	THR 6	ALA 148
F	THR 6	ALA 148
G	THR 6	ALA 148
H	THR 6	ALA 148

There are 96 helices in PDB entry 22RJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	103	116	Right-handed alpha
Helix 2	AA2	A	124	143	Right-handed alpha
Helix 3	AA3	A	150	179	Right-handed alpha
Helix 4	AA4	A	180	185	Right-handed 310
Helix 5	AA5	A	186	194	Right-handed alpha
Helix 6	AA6	A	196	210	Right-handed alpha
Helix 7	AA7	A	211	216	Right-handed alpha
Helix 8	AA8	A	227	239	Right-handed alpha
Helix 9	AA9	A	244	257	Right-handed alpha
Helix 10	AB1	A	257	284	Right-handed alpha
Helix 11	AB2	A	302	315	Right-handed alpha
Helix 12	AB3	A	326	365	Right-handed alpha
Helix 13	AB4	A	372	388	Right-handed alpha
Helix 14	AB5	A	517	537	Right-handed alpha
Helix 15	AB6	A	542	573	Right-handed alpha
Helix 16	AB7	B	104	116	Right-handed alpha
Helix 17	AB8	B	124	143	Right-handed alpha
Helix 18	AB9	B	150	179	Right-handed alpha
Helix 19	AC1	B	180	185	Right-handed 310
Helix 20	AC2	B	186	194	Right-handed alpha
Helix 21	AC3	B	196	210	Right-handed alpha
Helix 22	AC4	B	211	216	Right-handed alpha
Helix 23	AC5	B	227	239	Right-handed alpha
Helix 24	AC6	B	244	257	Right-handed alpha
Helix 25	AC7	B	257	284	Right-handed alpha
Helix 26	AC8	B	302	315	Right-handed alpha
Helix 27	AC9	B	326	365	Right-handed alpha
Helix 28	AD1	B	372	388	Right-handed alpha
Helix 29	AD2	B	517	539	Right-handed alpha
Helix 30	AD3	B	542	573	Right-handed alpha
Helix 31	AD4	C	104	116	Right-handed alpha
Helix 32	AD5	C	124	143	Right-handed alpha
Helix 33	AD6	C	150	179	Right-handed alpha
Helix 34	AD7	C	180	185	Right-handed 310
Helix 35	AD8	C	186	194	Right-handed alpha
Helix 36	AD9	C	196	210	Right-handed alpha
Helix 37	AE1	C	211	216	Right-handed alpha
Helix 38	AE2	C	227	239	Right-handed alpha
Helix 39	AE3	C	244	257	Right-handed alpha
Helix 40	AE4	C	257	284	Right-handed alpha
Helix 41	AE5	C	302	315	Right-handed alpha
Helix 42	AE6	C	326	365	Right-handed alpha
Helix 43	AE7	C	372	388	Right-handed alpha
Helix 44	AE8	C	517	539	Right-handed alpha
Helix 45	AE9	C	542	573	Right-handed alpha
Helix 46	AF1	D	104	116	Right-handed alpha
Helix 47	AF2	D	124	143	Right-handed alpha
Helix 48	AF3	D	150	179	Right-handed alpha
Helix 49	AF4	D	180	185	Right-handed 310
Helix 50	AF5	D	186	194	Right-handed alpha
Helix 51	AF6	D	196	210	Right-handed alpha
Helix 52	AF7	D	211	216	Right-handed alpha
Helix 53	AF8	D	227	239	Right-handed alpha
Helix 54	AF9	D	244	257	Right-handed alpha
Helix 55	AG1	D	257	284	Right-handed alpha
Helix 56	AG2	D	302	315	Right-handed alpha
Helix 57	AG3	D	326	365	Right-handed alpha
Helix 58	AG4	D	371	388	Right-handed alpha
Helix 59	AG5	D	517	537	Right-handed alpha
Helix 60	AG6	D	542	573	Right-handed alpha
Helix 61	AG7	E	7	21	Right-handed alpha
Helix 62	AG8	E	29	41	Right-handed alpha
Helix 63	AG9	E	45	57	Right-handed alpha
Helix 64	AH1	E	66	74	Right-handed alpha
Helix 65	AH2	E	76	80	Right-handed 310
Helix 66	AH3	E	82	92	Right-handed alpha
Helix 67	AH4	E	103	111	Right-handed alpha
Helix 68	AH5	E	118	130	Right-handed alpha
Helix 69	AH6	E	139	147	Right-handed alpha
Helix 70	AH7	F	7	21	Right-handed alpha
Helix 71	AH8	F	29	39	Right-handed alpha
Helix 72	AH9	F	45	57	Right-handed alpha
Helix 73	AI1	F	66	74	Right-handed alpha
Helix 74	AI2	F	76	80	Right-handed 310
Helix 75	AI3	F	82	92	Right-handed alpha
Helix 76	AI4	F	103	111	Right-handed alpha
Helix 77	AI5	F	118	130	Right-handed alpha
Helix 78	AI6	F	139	147	Right-handed alpha
Helix 79	AI7	G	7	21	Right-handed alpha
Helix 80	AI8	G	29	39	Right-handed alpha
Helix 81	AI9	G	45	57	Right-handed alpha
Helix 82	AJ1	G	66	74	Right-handed alpha
Helix 83	AJ2	G	76	80	Right-handed 310
Helix 84	AJ3	G	82	92	Right-handed alpha
Helix 85	AJ4	G	103	111	Right-handed alpha
Helix 86	AJ5	G	118	130	Right-handed alpha
Helix 87	AJ6	G	139	147	Right-handed alpha
Helix 88	AJ7	H	7	21	Right-handed alpha
Helix 89	AJ8	H	29	37	Right-handed alpha
Helix 90	AJ9	H	45	57	Right-handed alpha
Helix 91	AK1	H	66	74	Right-handed alpha
Helix 92	AK2	H	76	81	Right-handed 310
Helix 93	AK3	H	82	92	Right-handed alpha
Helix 94	AK4	H	103	111	Right-handed alpha
Helix 95	AK5	H	118	130	Right-handed alpha
Helix 96	AK6	H	139	145	Right-handed alpha

There are 8 sheets in PDB entry 22RJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	27	28	first strand
Strand 2	E	64	65	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	102	first strand
Strand 2	E	136	138	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	28	first strand
Strand 2	F	64	65	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	102	first strand
Strand 2	F	136	138	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	27	28	first strand
Strand 2	G	64	65	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	102	first strand
Strand 2	G	136	138	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	28	first strand
Strand 2	H	64	65	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	102	first strand
Strand 2	H	136	138	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 22RJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
22RJ