Analysis of interatomic Contacts of Structural Units in PDB entry:
22UY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22UY entry

There are 3 chains in PDB entry 22UY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 9TYR 263
B
 ASP 8TYR 263
C
 ILE 9ILE 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 22UY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 38Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
70 72Right-handed 310
Helix 4
AA4
A
110 118Right-handed alpha
Helix 5
AA5
A
133 137Right-handed 310
Helix 6
AA6
A
141 153Right-handed alpha
Helix 7
AA7
A
189 191Right-handed 310
Helix 8
AA8
A
246 251Right-handed alpha
Helix 9
AA9
B
24 40Right-handed alpha
Helix 10
AB1
B
57 69Right-handed alpha
Helix 11
AB2
B
70 72Right-handed 310
Helix 12
AB3
B
110 118Right-handed alpha
Helix 13
AB4
B
126 130Right-handed 310
Helix 14
AB5
B
141 153Right-handed alpha
Helix 15
AB6
B
189 191Right-handed 310
Helix 16
AB7
B
220 224Right-handed 310
Helix 17
AB8
B
246 252Right-handed alpha
Helix 18
AB9
C
24 40Right-handed alpha
Helix 19
AC1
C
57 69Right-handed alpha
Helix 20
AC2
C
70 72Right-handed 310
Helix 21
AC3
C
110 118Right-handed alpha
Helix 22
AC4
C
126 130Right-handed 310
Helix 23
AC5
C
141 153Right-handed alpha
Helix 24
AC6
C
246 252Right-handed alpha
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There are 6 sheets in PDB entry 22UY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 50first strand
Strand 2
A
12 17parallel
Strand 3
A
76 80parallel
Strand 4
A
101 105parallel
Strand 5
A
91 96anti-parallel
Strand 6
A
119 124anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
182 187anti-parallel
Strand 3
A
237 241anti-parallel
Strand 4
A
228 232anti-parallel
Strand 5
A
210 217parallel
Strand 6
A
198 204anti-parallel
Strand 7
A
258 262anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 50first strand
Strand 2
B
12 17parallel
Strand 3
B
76 80parallel
Strand 4
B
101 105parallel
Strand 5
B
91 96anti-parallel
Strand 6
B
119 124anti-parallel
Strand 7
B
159 160anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 176first strand
Strand 2
B
182 187anti-parallel
Strand 3
B
237 241anti-parallel
Strand 4
B
228 232anti-parallel
Strand 5
B
210 217parallel
Strand 6
B
198 204anti-parallel
Strand 7
B
258 262anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 50first strand
Strand 2
C
12 17parallel
Strand 3
C
76 80parallel
Strand 4
C
101 105parallel
Strand 5
C
91 96anti-parallel
Strand 6
C
119 124anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 176first strand
Strand 2
C
182 184anti-parallel
Strand 3
C
238 242anti-parallel
Strand 4
C
228 232anti-parallel
Strand 5
C
210 217parallel
Strand 6
C
199 204anti-parallel
Strand 7
C
258 262anti-parallel
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