Analysis of interatomic Contacts of Structural Units in PDB entry:
22VL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 22VL entry

There are 26 chains in PDB entry 22VL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	VAL 22	LEU 244
p	VAL 92	PRO 220
D	LEU 37	GLY 358
d	SER 74	THR 246
b	GLU 28	PHE 179
e	MET 1	LYS 136
M	PRO 3	ALA 81
F	PRO 3	ALA 81
G	PRO 3	ALA 81
H	PRO 3	ALA 81
I	PRO 3	ALA 81
J	PRO 3	ALA 81
K	PRO 3	ALA 81
L	PRO 3	ALA 81
N	PRO 3	ALA 81
O	PRO 3	ALA 81
P	PRO 3	ALA 81
Q	PRO 3	ALA 81
R	PRO 3	ALA 81
S	PRO 3	ALA 81
A	LYS 25	ALA 508
B	MET 26	ALA 507
E	THR 7	LYS 481
T	THR 7	LYS 481
U	THR 7	LYS 481
V	LYS 25	ALA 508

There are206 helices in PDB entry 22VL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	37	57	Right-handed alpha
Helix 2	AA2	a	68	87	Right-handed alpha
Helix 3	AA3	a	90	94	Right-handed 310
Helix 4	AA4	a	95	103	Right-handed alpha
Helix 5	AA5	a	103	116	Right-handed alpha
Helix 6	AA6	a	130	133	Right-handed 310
Helix 7	AA7	a	134	157	Right-handed alpha
Helix 8	AA8	a	171	188	Right-handed alpha
Helix 9	AA9	a	189	206	Right-handed alpha
Helix 10	AB1	a	214	244	Right-handed alpha
Helix 11	AB2	p	93	102	Right-handed alpha
Helix 12	AB3	p	105	219	Right-handed alpha
Helix 13	AB4	D	38	75	Right-handed alpha
Helix 14	AB5	D	75	93	Right-handed alpha
Helix 15	AB6	D	125	144	Right-handed alpha
Helix 16	AB7	D	154	165	Right-handed alpha
Helix 17	AB8	D	180	196	Right-handed alpha
Helix 18	AB9	D	280	283	Right-handed 310
Helix 19	AC1	D	284	358	Right-handed alpha
Helix 20	AC2	d	75	89	Right-handed alpha
Helix 21	AC3	d	93	106	Right-handed alpha
Helix 22	AC4	d	108	117	Right-handed alpha
Helix 23	AC5	d	121	137	Right-handed alpha
Helix 24	AC6	d	139	152	Right-handed alpha
Helix 25	AC7	d	161	172	Right-handed alpha
Helix 26	AC8	d	190	203	Right-handed alpha
Helix 27	AC9	d	234	243	Right-handed alpha
Helix 28	AD1	b	31	106	Right-handed alpha
Helix 29	AD2	b	106	159	Right-handed alpha
Helix 30	AD3	b	160	177	Right-handed alpha
Helix 31	AD4	e	91	93	Right-handed 310
Helix 32	AD5	e	94	110	Right-handed alpha
Helix 33	AD6	e	114	130	Right-handed alpha
Helix 34	AD7	e	131	135	Right-handed 310
Helix 35	AD8	M	4	22	Right-handed alpha
Helix 36	AD9	M	22	42	Right-handed alpha
Helix 37	AE1	M	45	61	Right-handed alpha
Helix 38	AE2	M	61	76	Right-handed alpha
Helix 39	AE3	F	4	20	Right-handed alpha
Helix 40	AE4	F	21	42	Right-handed alpha
Helix 41	AE5	F	45	62	Right-handed alpha
Helix 42	AE6	F	62	77	Right-handed alpha
Helix 43	AE7	G	4	21	Right-handed alpha
Helix 44	AE8	G	21	42	Right-handed alpha
Helix 45	AE9	G	45	74	Right-handed alpha
Helix 46	AF1	H	4	19	Right-handed alpha
Helix 47	AF2	H	21	42	Right-handed alpha
Helix 48	AF3	H	45	61	Right-handed alpha
Helix 49	AF4	H	62	76	Right-handed alpha
Helix 50	AF5	I	4	20	Right-handed alpha
Helix 51	AF6	I	21	42	Right-handed alpha
Helix 52	AF7	I	45	76	Right-handed alpha
Helix 53	AF8	J	4	20	Right-handed alpha
Helix 54	AF9	J	21	42	Right-handed alpha
Helix 55	AG1	J	45	72	Right-handed alpha
Helix 56	AG2	K	4	21	Right-handed alpha
Helix 57	AG3	K	21	42	Right-handed alpha
Helix 58	AG4	K	45	76	Right-handed alpha
Helix 59	AG5	L	4	21	Right-handed alpha
Helix 60	AG6	L	21	42	Right-handed alpha
Helix 61	AG7	L	45	50	Right-handed alpha
Helix 62	AG8	L	53	77	Right-handed alpha
Helix 63	AG9	N	4	21	Right-handed alpha
Helix 64	AH1	N	22	42	Right-handed alpha
Helix 65	AH2	N	45	77	Right-handed alpha
Helix 66	AH3	O	4	12	Right-handed alpha
Helix 67	AH4	O	12	19	Right-handed alpha
Helix 68	AH5	O	21	40	Right-handed alpha
Helix 69	AH6	O	45	51	Right-handed alpha
Helix 70	AH7	O	52	73	Right-handed alpha
Helix 71	AH8	P	4	10	Right-handed alpha
Helix 72	AH9	P	10	19	Right-handed alpha
Helix 73	AI1	P	21	42	Right-handed alpha
Helix 74	AI2	P	45	77	Right-handed alpha
Helix 75	AI3	Q	4	19	Right-handed alpha
Helix 76	AI4	Q	21	42	Right-handed alpha
Helix 77	AI5	Q	45	77	Right-handed alpha
Helix 78	AI6	R	4	20	Right-handed alpha
Helix 79	AI7	R	21	42	Right-handed alpha
Helix 80	AI8	R	45	76	Right-handed alpha
Helix 81	AI9	S	4	21	Right-handed alpha
Helix 82	AJ1	S	22	42	Right-handed alpha
Helix 83	AJ2	S	45	61	Right-handed alpha
Helix 84	AJ3	S	61	77	Right-handed alpha
Helix 85	AJ4	A	101	105	Right-handed 310
Helix 86	AJ5	A	151	158	Right-handed alpha
Helix 87	AJ6	A	175	186	Right-handed alpha
Helix 88	AJ7	A	202	217	Right-handed alpha
Helix 89	AJ8	A	218	220	Right-handed 310
Helix 90	AJ9	A	232	252	Right-handed alpha
Helix 91	AK1	A	263	278	Right-handed alpha
Helix 92	AK2	A	290	300	Right-handed alpha
Helix 93	AK3	A	329	339	Right-handed alpha
Helix 94	AK4	A	346	353	Right-handed alpha
Helix 95	AK5	A	373	380	Right-handed alpha
Helix 96	AK6	A	382	397	Right-handed alpha
Helix 97	AK7	A	404	418	Right-handed alpha
Helix 98	AK8	A	430	443	Right-handed alpha
Helix 99	AK9	A	450	452	Right-handed 310
Helix 100	AL1	A	453	469	Right-handed alpha
Helix 101	AL2	A	469	480	Right-handed alpha
Helix 102	AL3	A	483	508	Right-handed alpha
Helix 103	AL4	B	101	105	Right-handed 310
Helix 104	AL5	B	151	158	Right-handed alpha
Helix 105	AL6	B	175	186	Right-handed alpha
Helix 106	AL7	B	202	216	Right-handed alpha
Helix 107	AL8	B	217	220	Right-handed 310
Helix 108	AL9	B	232	252	Right-handed alpha
Helix 109	AM1	B	263	277	Right-handed alpha
Helix 110	AM2	B	290	300	Right-handed alpha
Helix 111	AM3	B	329	339	Right-handed alpha
Helix 112	AM4	B	346	352	Right-handed alpha
Helix 113	AM5	B	368	372	Right-handed 310
Helix 114	AM6	B	379	393	Right-handed alpha
Helix 115	AM7	B	396	400	Right-handed 310
Helix 116	AM8	B	404	418	Right-handed alpha
Helix 117	AM9	B	430	443	Right-handed alpha
Helix 118	AN1	B	453	468	Right-handed alpha
Helix 119	AN2	B	469	480	Right-handed alpha
Helix 120	AN3	B	483	506	Right-handed alpha
Helix 121	AN4	E	93	97	Right-handed 310
Helix 122	AN5	E	143	149	Right-handed alpha
Helix 123	AN6	E	167	183	Right-handed alpha
Helix 124	AN7	E	195	209	Right-handed alpha
Helix 125	AN8	E	216	220	Right-handed 310
Helix 126	AN9	E	232	237	Right-handed alpha
Helix 127	AO1	E	238	253	Right-handed alpha
Helix 128	AO2	E	265	280	Right-handed alpha
Helix 129	AO3	E	291	301	Right-handed alpha
Helix 130	AO4	E	326	333	Right-handed alpha
Helix 131	AO5	E	343	350	Right-handed alpha
Helix 132	AO6	E	366	371	Right-handed alpha
Helix 133	AO7	E	371	391	Right-handed alpha
Helix 134	AO8	E	391	399	Right-handed alpha
Helix 135	AO9	E	400	403	Right-handed 310
Helix 136	AP1	E	404	421	Right-handed alpha
Helix 137	AP2	E	428	433	Right-handed alpha
Helix 138	AP3	E	441	454	Right-handed alpha
Helix 139	AP4	E	455	459	Right-handed 310
Helix 140	AP5	E	460	465	Right-handed 310
Helix 141	AP6	E	469	481	Right-handed alpha
Helix 142	AP7	T	93	97	Right-handed 310
Helix 143	AP8	T	128	132	Right-handed 310
Helix 144	AP9	T	145	150	Right-handed alpha
Helix 145	AQ1	T	167	180	Right-handed alpha
Helix 146	AQ2	T	195	209	Right-handed alpha
Helix 147	AQ3	T	216	220	Right-handed 310
Helix 148	AQ4	T	232	237	Right-handed alpha
Helix 149	AQ5	T	238	253	Right-handed alpha
Helix 150	AQ6	T	265	280	Right-handed alpha
Helix 151	AQ7	T	291	301	Right-handed alpha
Helix 152	AQ8	T	319	323	Right-handed 310
Helix 153	AQ9	T	326	333	Right-handed alpha
Helix 154	AR1	T	334	336	Right-handed 310
Helix 155	AR2	T	343	349	Right-handed alpha
Helix 156	AR3	T	366	371	Right-handed alpha
Helix 157	AR4	T	371	391	Right-handed alpha
Helix 158	AR5	T	391	399	Right-handed alpha
Helix 159	AR6	T	404	421	Right-handed alpha
Helix 160	AR7	T	426	431	Right-handed 310
Helix 161	AR8	T	440	453	Right-handed alpha
Helix 162	AR9	T	460	465	Right-handed 310
Helix 163	AS1	T	469	479	Right-handed alpha
Helix 164	AS2	U	93	97	Right-handed 310
Helix 165	AS3	U	143	150	Right-handed alpha
Helix 166	AS4	U	167	180	Right-handed alpha
Helix 167	AS5	U	181	183	Right-handed 310
Helix 168	AS6	U	195	209	Right-handed alpha
Helix 169	AS7	U	216	220	Right-handed 310
Helix 170	AS8	U	232	237	Right-handed alpha
Helix 171	AS9	U	238	253	Right-handed alpha
Helix 172	AT1	U	264	277	Right-handed alpha
Helix 173	AT2	U	284	288	Right-handed 310
Helix 174	AT3	U	291	301	Right-handed alpha
Helix 175	AT4	U	320	323	Right-handed 310
Helix 176	AT5	U	326	333	Right-handed alpha
Helix 177	AT6	U	343	350	Right-handed alpha
Helix 178	AT7	U	366	371	Right-handed alpha
Helix 179	AT8	U	371	391	Right-handed alpha
Helix 180	AT9	U	391	399	Right-handed alpha
Helix 181	AU1	U	400	403	Right-handed 310
Helix 182	AU2	U	404	421	Right-handed alpha
Helix 183	AU3	U	428	433	Right-handed alpha
Helix 184	AU4	U	440	453	Right-handed alpha
Helix 185	AU5	U	461	465	Right-handed 310
Helix 186	AU6	U	469	481	Right-handed alpha
Helix 187	AU7	V	101	105	Right-handed 310
Helix 188	AU8	V	151	156	Right-handed alpha
Helix 189	AU9	V	175	187	Right-handed alpha
Helix 190	AV1	V	202	216	Right-handed alpha
Helix 191	AV2	V	217	220	Right-handed 310
Helix 192	AV3	V	232	252	Right-handed alpha
Helix 193	AV4	V	263	277	Right-handed alpha
Helix 194	AV5	V	290	300	Right-handed alpha
Helix 195	AV6	V	329	337	Right-handed alpha
Helix 196	AV7	V	346	351	Right-handed alpha
Helix 197	AV8	V	367	372	Right-handed 310
Helix 198	AV9	V	373	393	Right-handed alpha
Helix 199	AW1	V	394	398	Right-handed 310
Helix 200	AW2	V	404	419	Right-handed alpha
Helix 201	AW3	V	430	443	Right-handed alpha
Helix 202	AW4	V	444	449	Right-handed 310
Helix 203	AW5	V	450	452	Right-handed 310
Helix 204	AW6	V	453	469	Right-handed alpha
Helix 205	AW7	V	469	477	Right-handed alpha
Helix 206	AW8	V	483	508	Right-handed alpha

There are 26 sheets in PDB entry 22VL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	28	30	first strand
Strand 2	a	34	36	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	172	first strand
Strand 2	D	147	152	parallel
Strand 3	D	110	115	parallel
Strand 4	D	202	207	parallel
Strand 5	D	219	224	anti-parallel
Strand 6	D	232	234	anti-parallel
Strand 7	D	239	240	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	252	first strand
Strand 2	D	257	262	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	206	213	first strand
Strand 2	d	175	182	parallel
Strand 3	d	222	223	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	12	19	first strand
Strand 2	e	3	9	anti-parallel
Strand 3	e	79	84	parallel
Strand 4	e	71	74	anti-parallel
Strand 5	e	41	43	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	29	33	first strand
Strand 2	e	21	26	anti-parallel
Strand 3	e	47	53	anti-parallel
Strand 4	e	62	68	anti-parallel
Strand 5	e	87	89	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	36	first strand
Strand 2	A	39	43	anti-parallel
Strand 3	A	71	76	anti-parallel
Strand 4	A	61	67	anti-parallel
Strand 5	A	52	55	anti-parallel
Strand 6	A	88	95	anti-parallel
Strand 7	A	29	36	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	99	first strand
Strand 2	A	127	129	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	222	227	parallel
Strand 3	A	193	199	parallel
Strand 4	A	256	261	parallel
Strand 5	A	313	316	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	321	first strand
Strand 2	A	168	170	parallel
Strand 3	A	343	345	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	36	first strand
Strand 2	B	39	43	anti-parallel
Strand 3	B	71	76	anti-parallel
Strand 4	B	61	67	anti-parallel
Strand 5	B	52	55	anti-parallel
Strand 6	B	88	95	anti-parallel
Strand 7	B	29	36	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	100	first strand
Strand 2	B	126	129	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	222	226	parallel
Strand 3	B	193	198	parallel
Strand 4	B	256	261	parallel
Strand 5	B	313	321	parallel
Strand 6	B	167	170	parallel
Strand 7	B	341	344	parallel
Strand 8	B	364	365	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	17	first strand
Strand 2	E	20	25	anti-parallel
Strand 3	E	63	68	anti-parallel
Strand 4	E	48	59	anti-parallel
Strand 5	E	36	42	anti-parallel
Strand 6	E	80	84	anti-parallel
Strand 7	E	9	17	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	91	first strand
Strand 2	E	119	121	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	222	228	parallel
Strand 3	E	187	194	parallel
Strand 4	E	257	262	parallel
Strand 5	E	310	316	parallel
Strand 6	E	157	161	parallel
Strand 7	E	338	341	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	138	139	first strand
Strand 2	E	152	153	anti-parallel

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There are 14 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	10	17	first strand
Strand 2	T	20	25	anti-parallel
Strand 3	T	63	68	anti-parallel
Strand 4	T	47	60	anti-parallel
Strand 5	T	36	43	anti-parallel
Strand 6	T	80	84	anti-parallel
Strand 7	T	10	17	anti-parallel
Strand 8	V	61	67	anti-parallel
Strand 9	V	72	76	anti-parallel
Strand 10	V	39	42	anti-parallel
Strand 11	V	29	36	anti-parallel
Strand 12	V	88	95	anti-parallel
Strand 13	V	52	56	anti-parallel
Strand 14	V	61	67	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	89	90	first strand
Strand 2	T	120	121	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	100	101	first strand
Strand 2	T	223	227	parallel
Strand 3	T	187	192	parallel
Strand 4	T	258	262	parallel
Strand 5	T	311	316	parallel
Strand 6	T	158	161	parallel
Strand 7	T	338	341	parallel
Strand 8	T	361	362	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	138	139	first strand
Strand 2	T	152	153	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	9	17	first strand
Strand 2	U	20	24	anti-parallel
Strand 3	U	63	68	anti-parallel
Strand 4	U	52	59	anti-parallel
Strand 5	U	36	38	anti-parallel
Strand 6	U	80	84	anti-parallel
Strand 7	U	9	17	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	89	91	first strand
Strand 2	U	119	121	anti-parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	100	101	first strand
Strand 2	U	222	227	parallel
Strand 3	U	186	192	parallel
Strand 4	U	258	263	parallel
Strand 5	U	311	318	parallel
Strand 6	U	157	162	parallel
Strand 7	U	338	341	parallel
Strand 8	U	361	362	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	97	100	first strand
Strand 2	V	126	129	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	108	109	first strand
Strand 2	V	222	226	parallel
Strand 3	V	193	198	parallel
Strand 4	V	256	261	parallel
Strand 5	V	313	321	parallel
Strand 6	V	167	170	parallel
Strand 7	V	341	345	parallel
Strand 8	V	364	365	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 22VL

Analysis of interatomic Contacts of Structural Units in PDB entry:
22VL