Analysis of interatomic Contacts of Structural Units in PDB entry:
22VT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 22VT entry

There are 6 chains in PDB entry 22VT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
2	TRP 185	GLN 902
3	ALA 15	ILE 808
4	ASN 158	LEU 863
6	ASP 20	LEU 787
7	ASP 5	LEU 644
5	GLY 24	LEU 733

There are150 helices in PDB entry 22VT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	2	190	204	Right-handed alpha
Helix 2	AA2	2	213	225	Right-handed alpha
Helix 3	AA3	2	234	239	Right-handed alpha
Helix 4	AA4	2	241	251	Right-handed alpha
Helix 5	AA5	2	251	271	Right-handed alpha
Helix 6	AA6	2	293	297	Right-handed 310
Helix 7	AA7	2	298	302	Right-handed 310
Helix 8	AA8	2	458	470	Right-handed alpha
Helix 9	AA9	2	472	481	Right-handed alpha
Helix 10	AB1	2	488	501	Right-handed alpha
Helix 11	AB2	2	528	540	Right-handed alpha
Helix 12	AB3	2	574	579	Right-handed alpha
Helix 13	AB4	2	593	606	Right-handed alpha
Helix 14	AB5	2	632	636	Right-handed 310
Helix 15	AB6	2	642	647	Right-handed alpha
Helix 16	AB7	2	650	657	Right-handed alpha
Helix 17	AB8	2	668	686	Right-handed alpha
Helix 18	AB9	2	719	727	Right-handed alpha
Helix 19	AC1	2	739	757	Right-handed alpha
Helix 20	AC2	2	763	781	Right-handed alpha
Helix 21	AC3	2	787	803	Right-handed alpha
Helix 22	AC4	2	807	816	Right-handed alpha
Helix 23	AC5	2	818	823	Right-handed alpha
Helix 24	AC6	2	829	851	Right-handed alpha
Helix 25	AC7	2	852	855	Right-handed 310
Helix 26	AC8	2	865	873	Right-handed alpha
Helix 27	AC9	2	877	883	Right-handed alpha
Helix 28	AD1	2	883	889	Right-handed alpha
Helix 29	AD2	3	15	18	Right-handed 310
Helix 30	AD3	3	19	24	Right-handed alpha
Helix 31	AD4	3	38	43	Right-handed alpha
Helix 32	AD5	3	51	58	Right-handed alpha
Helix 33	AD6	3	58	68	Right-handed alpha
Helix 34	AD7	3	69	88	Right-handed alpha
Helix 35	AD8	3	88	95	Right-handed alpha
Helix 36	AD9	3	117	121	Right-handed 310
Helix 37	AE1	3	277	291	Right-handed alpha
Helix 38	AE2	3	295	302	Right-handed alpha
Helix 39	AE3	3	310	323	Right-handed alpha
Helix 40	AE4	3	351	360	Right-handed alpha
Helix 41	AE5	3	398	402	Right-handed 310
Helix 42	AE6	3	411	414	Right-handed 310
Helix 43	AE7	3	415	428	Right-handed alpha
Helix 44	AE8	3	464	469	Right-handed alpha
Helix 45	AE9	3	472	477	Right-handed alpha
Helix 46	AF1	3	490	506	Right-handed alpha
Helix 47	AF2	3	564	577	Right-handed alpha
Helix 48	AF3	3	583	599	Right-handed alpha
Helix 49	AF4	3	614	633	Right-handed alpha
Helix 50	AF5	3	638	654	Right-handed alpha
Helix 51	AF6	3	741	759	Right-handed alpha
Helix 52	AF7	3	765	775	Right-handed alpha
Helix 53	AF8	3	781	795	Right-handed alpha
Helix 54	AF9	4	159	172	Right-handed alpha
Helix 55	AG1	4	192	200	Right-handed alpha
Helix 56	AG2	4	213	219	Right-handed alpha
Helix 57	AG3	4	219	229	Right-handed alpha
Helix 58	AG4	4	229	248	Right-handed alpha
Helix 59	AG5	4	275	279	Right-handed 310
Helix 60	AG6	4	341	344	Right-handed 310
Helix 61	AG7	4	377	379	Right-handed 310
Helix 62	AG8	4	444	454	Right-handed alpha
Helix 63	AG9	4	457	465	Right-handed alpha
Helix 64	AH1	4	473	486	Right-handed alpha
Helix 65	AH2	4	518	527	Right-handed alpha
Helix 66	AH3	4	561	566	Right-handed alpha
Helix 67	AH4	4	580	593	Right-handed alpha
Helix 68	AH5	4	629	635	Right-handed alpha
Helix 69	AH6	4	637	642	Right-handed alpha
Helix 70	AH7	4	655	671	Right-handed alpha
Helix 71	AH8	4	676	696	Right-handed alpha
Helix 72	AH9	4	703	723	Right-handed alpha
Helix 73	AI1	4	731	748	Right-handed alpha
Helix 74	AI2	4	754	773	Right-handed alpha
Helix 75	AI3	4	783	788	Right-handed alpha
Helix 76	AI4	4	791	795	Right-handed 310
Helix 77	AI5	4	800	812	Right-handed alpha
Helix 78	AI6	4	820	831	Right-handed alpha
Helix 79	AI7	4	836	847	Right-handed alpha
Helix 80	AI8	4	848	850	Right-handed 310
Helix 81	AI9	6	21	36	Right-handed alpha
Helix 82	AJ1	6	44	52	Right-handed alpha
Helix 83	AJ2	6	53	55	Right-handed 310
Helix 84	AJ3	6	65	72	Right-handed alpha
Helix 85	AJ4	6	72	80	Right-handed alpha
Helix 86	AJ5	6	86	100	Right-handed alpha
Helix 87	AJ6	6	122	126	Right-handed 310
Helix 88	AJ7	6	186	189	Right-handed 310
Helix 89	AJ8	6	231	233	Right-handed 310
Helix 90	AJ9	6	321	329	Right-handed alpha
Helix 91	AK1	6	330	343	Right-handed alpha
Helix 92	AK2	6	345	355	Right-handed alpha
Helix 93	AK3	6	361	374	Right-handed alpha
Helix 94	AK4	6	401	413	Right-handed alpha
Helix 95	AK5	6	462	465	Right-handed 310
Helix 96	AK6	6	466	476	Right-handed alpha
Helix 97	AK7	6	515	519	Right-handed 310
Helix 98	AK8	6	523	530	Right-handed alpha
Helix 99	AK9	6	542	558	Right-handed alpha
Helix 100	AL1	6	571	582	Right-handed alpha
Helix 101	AL2	6	587	605	Right-handed alpha
Helix 102	AL3	6	618	635	Right-handed alpha
Helix 103	AL4	6	641	656	Right-handed alpha
Helix 104	AL5	6	721	739	Right-handed alpha
Helix 105	AL6	6	751	759	Right-handed alpha
Helix 106	AL7	6	767	777	Right-handed alpha
Helix 107	AL8	7	31	40	Right-handed alpha
Helix 108	AL9	7	51	59	Right-handed alpha
Helix 109	AM1	7	59	69	Right-handed alpha
Helix 110	AM2	7	69	84	Right-handed alpha
Helix 111	AM3	7	148	152	Right-handed 310
Helix 112	AM4	7	208	215	Right-handed alpha
Helix 113	AM5	7	332	340	Right-handed alpha
Helix 114	AM6	7	347	360	Right-handed alpha
Helix 115	AM7	7	386	398	Right-handed alpha
Helix 116	AM8	7	406	410	Right-handed 310
Helix 117	AM9	7	424	428	Right-handed 310
Helix 118	AN1	7	451	465	Right-handed alpha
Helix 119	AN2	7	500	505	Right-handed alpha
Helix 120	AN3	7	508	515	Right-handed alpha
Helix 121	AN4	7	526	544	Right-handed alpha
Helix 122	AN5	7	555	566	Right-handed alpha
Helix 123	AN6	7	574	576	Right-handed 310
Helix 124	AN7	7	577	596	Right-handed alpha
Helix 125	AN8	7	602	620	Right-handed alpha
Helix 126	AN9	7	626	641	Right-handed alpha
Helix 127	AO1	5	30	37	Right-handed alpha
Helix 128	AO2	5	46	52	Right-handed 310
Helix 129	AO3	5	53	63	Right-handed alpha
Helix 130	AO4	5	73	79	Right-handed alpha
Helix 131	AO5	5	81	91	Right-handed alpha
Helix 132	AO6	5	91	108	Right-handed alpha
Helix 133	AO7	5	141	145	Right-handed 310
Helix 134	AO8	5	316	320	Right-handed alpha
Helix 135	AO9	5	320	328	Right-handed alpha
Helix 136	AP1	5	329	338	Right-handed alpha
Helix 137	AP2	5	346	359	Right-handed alpha
Helix 138	AP3	5	383	398	Right-handed alpha
Helix 139	AP4	5	432	437	Right-handed alpha
Helix 140	AP5	5	446	450	Right-handed 310
Helix 141	AP6	5	451	465	Right-handed alpha
Helix 142	AP7	5	507	514	Right-handed 310
Helix 143	AP8	5	555	569	Right-handed alpha
Helix 144	AP9	5	575	590	Right-handed alpha
Helix 145	AQ1	5	597	602	Right-handed alpha
Helix 146	AQ2	5	609	627	Right-handed alpha
Helix 147	AQ3	5	633	652	Right-handed alpha
Helix 148	AQ4	5	664	683	Right-handed alpha
Helix 149	AQ5	5	691	701	Right-handed alpha
Helix 150	AQ6	5	704	718	Right-handed alpha

There are 41 sheets in PDB entry 22VT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	230	233	first strand
Strand 2	2	283	286	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	417	422	first strand
Strand 2	2	435	440	anti-parallel
Strand 3	2	393	398	parallel
Strand 4	2	374	379	anti-parallel
Strand 5	2	308	312	anti-parallel
Strand 6	2	411	414	anti-parallel
Strand 7	2	444	446	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	314	315	first strand
Strand 2	2	569	572	anti-parallel
Strand 3	2	559	562	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	335	340	first strand
Strand 2	2	322	328	anti-parallel
Strand 3	2	362	370	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	546	547	first strand
Strand 2	2	586	587	parallel
Strand 3	2	627	629	parallel
Strand 4	2	519	523	parallel
Strand 5	2	659	663	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	582	583	first strand
Strand 2	2	624	625	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	610	613	first strand
Strand 2	2	616	619	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	47	50	first strand
Strand 2	3	100	103	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	124	126	first strand
Strand 2	3	238	240	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	234	235	first strand
Strand 2	3	129	135	anti-parallel
Strand 3	3	197	202	anti-parallel
Strand 4	3	217	221	anti-parallel
Strand 5	3	259	261	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	234	235	first strand
Strand 2	3	129	135	anti-parallel
Strand 3	3	391	394	anti-parallel
Strand 4	3	382	384	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	327	328	first strand
Strand 2	3	334	335	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	404	409	first strand
Strand 2	3	446	452	parallel
Strand 3	3	341	345	parallel
Strand 4	3	481	485	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	430	432	first strand
Strand 2	3	441	443	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	762	764	first strand
Strand 2	3	804	807	anti-parallel
Strand 3	3	798	801	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	282	285	first strand
Strand 2	4	390	397	anti-parallel
Strand 3	4	413	417	anti-parallel
Strand 4	4	370	375	parallel
Strand 5	4	349	354	anti-parallel
Strand 6	4	289	292	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	299	300	first strand
Strand 2	4	346	347	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	312	313	first strand
Strand 2	4	304	306	anti-parallel
Strand 3	4	337	339	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	317	318	first strand
Strand 2	4	321	322	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	408	409	first strand
Strand 2	7	199	200	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	533	534	first strand
Strand 2	4	573	574	parallel
Strand 3	4	614	617	parallel
Strand 4	4	506	509	parallel
Strand 5	4	646	649	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	546	550	first strand
Strand 2	4	555	559	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	595	600	first strand
Strand 2	4	603	608	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	60	64	first strand
Strand 2	6	111	115	parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	134	135	first strand
Strand 2	6	241	251	anti-parallel
Strand 3	6	295	305	anti-parallel
Strand 4	6	223	226	parallel
Strand 5	6	206	209	anti-parallel
Strand 6	6	138	144	anti-parallel
Strand 7	6	241	251	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	164	169	first strand
Strand 2	6	148	158	anti-parallel
Strand 3	6	191	193	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	164	169	first strand
Strand 2	6	148	158	anti-parallel
Strand 3	6	199	204	anti-parallel
Strand 4	6	228	229	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	378	379	first strand
Strand 2	6	385	386	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	417	420	first strand
Strand 2	6	456	460	parallel
Strand 3	6	498	503	parallel
Strand 4	6	392	396	parallel
Strand 5	6	532	536	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	433	435	first strand
Strand 2	6	442	444	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	481	486	first strand
Strand 2	6	489	494	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	585	586	first strand
Strand 2	6	639	640	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	47	49	first strand
Strand 2	7	135	137	parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	270	271	first strand
Strand 2	7	165	170	anti-parallel
Strand 3	7	234	238	anti-parallel
Strand 4	7	252	256	anti-parallel
Strand 5	7	298	299	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	190	194	first strand
Strand 2	7	174	183	anti-parallel
Strand 3	7	221	232	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	401	404	first strand
Strand 2	7	441	444	parallel
Strand 3	7	483	486	parallel
Strand 4	7	377	378	parallel
Strand 5	7	517	518	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	244	246	first strand
Strand 2	5	228	230	anti-parallel
Strand 3	5	153	157	anti-parallel
Strand 4	5	262	263	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	266	268	first strand
Strand 2	5	295	298	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	401	403	first strand
Strand 2	5	441	443	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	417	418	first strand
Strand 2	5	428	430	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	688	690	first strand
Strand 2	5	729	732	anti-parallel
Strand 3	5	721	724	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 22VT

Analysis of interatomic Contacts of Structural Units in PDB entry:
22VT