Analysis of interatomic Contacts of Structural Units in PDB entry:
22YZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22YZ entry

There are 2 chains in PDB entry 22YZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 102LYS 460
B
 LEU 102LYS 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 22YZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 124Right-handed alpha
Helix 2
AA2
A
125 135Right-handed alpha
Helix 3
AA3
A
141 148Right-handed alpha
Helix 4
AA4
A
149 150Right-handed 310
Helix 5
AA5
A
151 155Right-handed 310
Helix 6
AA6
A
156 169Right-handed alpha
Helix 7
AA7
A
212 225Right-handed alpha
Helix 8
AA8
A
232 238Right-handed alpha
Helix 9
AA9
A
239 241Right-handed 310
Helix 10
AB1
A
255 266Right-handed alpha
Helix 11
AB2
A
269 273Right-handed 310
Helix 12
AB3
A
288 318Right-handed alpha
Helix 13
AB4
A
321 328Right-handed alpha
Helix 14
AB5
A
328 346Right-handed alpha
Helix 15
AB6
A
347 350Right-handed 310
Helix 16
AB7
A
351 353Right-handed 310
Helix 17
AB8
A
354 360Right-handed alpha
Helix 18
AB9
A
368 384Right-handed alpha
Helix 19
AC1
A
392 405Right-handed alpha
Helix 20
AC2
A
409 420Right-handed alpha
Helix 21
AC3
A
421 430Right-handed alpha
Helix 22
AC4
A
436 447Right-handed alpha
Helix 23
AC5
B
119 124Right-handed alpha
Helix 24
AC6
B
125 135Right-handed alpha
Helix 25
AC7
B
141 148Right-handed alpha
Helix 26
AC8
B
149 150Right-handed 310
Helix 27
AC9
B
151 155Right-handed 310
Helix 28
AD1
B
156 169Right-handed alpha
Helix 29
AD2
B
212 225Right-handed alpha
Helix 30
AD3
B
232 238Right-handed alpha
Helix 31
AD4
B
239 241Right-handed 310
Helix 32
AD5
B
255 266Right-handed alpha
Helix 33
AD6
B
269 273Right-handed 310
Helix 34
AD7
B
288 318Right-handed alpha
Helix 35
AD8
B
321 328Right-handed alpha
Helix 36
AD9
B
328 346Right-handed alpha
Helix 37
AE1
B
347 350Right-handed 310
Helix 38
AE2
B
351 353Right-handed 310
Helix 39
AE3
B
354 360Right-handed alpha
Helix 40
AE4
B
368 384Right-handed alpha
Helix 41
AE5
B
392 405Right-handed alpha
Helix 42
AE6
B
409 420Right-handed alpha
Helix 43
AE7
B
421 430Right-handed alpha
Helix 44
AE8
B
436 447Right-handed alpha
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There are 4 sheets in PDB entry 22YZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
186 194anti-parallel
Strand 3
A
173 183anti-parallel
Strand 4
A
275 281parallel
Strand 5
A
243 250anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
173 183anti-parallel
Strand 3
A
186 194anti-parallel
Strand 4
A
385 391anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 200first strand
Strand 2
B
186 194anti-parallel
Strand 3
B
173 183anti-parallel
Strand 4
B
275 281parallel
Strand 5
B
243 250anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 206first strand
Strand 2
B
173 183anti-parallel
Strand 3
B
186 194anti-parallel
Strand 4
B
385 391anti-parallel
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