Analysis of interatomic Contacts of Structural Units in PDB entry:
22ZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 22ZO entry

There is 1 chain in PDB entry 22ZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 216SER 965
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 22ZO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
226 233Right-handed alpha
Helix 2
AA2
A
245 252Right-handed 310
Helix 3
AA3
A
271 278Right-handed alpha
Helix 4
AA4
A
285 290Right-handed 310
Helix 5
AA5
A
383 385Right-handed 310
Helix 6
AA6
A
465 474Right-handed alpha
Helix 7
AA7
A
506 517Right-handed alpha
Helix 8
AA8
A
552 561Right-handed alpha
Helix 9
AA9
A
583 587Right-handed 310
Helix 10
AB1
A
592 605Right-handed alpha
Helix 11
AB2
A
610 614Right-handed 310
Helix 12
AB3
A
732 734Right-handed 310
Helix 13
AB4
A
764 769Right-handed alpha
Helix 14
AB5
A
816 820Right-handed 310
Helix 15
AB6
A
859 867Right-handed alpha
Helix 16
AB7
A
893 898Right-handed alpha
Helix 17
AB8
A
931 933Right-handed 310
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There are 16 sheets in PDB entry 22ZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
234 237first strand
Strand 2
A
240 243anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
299 310first strand
Strand 2
A
387 397anti-parallel
Strand 3
A
449 451anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
440 441first strand
Strand 2
A
387 397anti-parallel
Strand 3
A
462 464anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
312 345first strand
Strand 2
A
348 381anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
420 425first strand
Strand 2
A
403 414anti-parallel
Strand 3
A
432 435anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
420 425first strand
Strand 2
A
403 414anti-parallel
Strand 3
A
479 489anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
492 493first strand
Strand 2
A
499 500anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
532 537first strand
Strand 2
A
518 524anti-parallel
Strand 3
A
621 625parallel
Strand 4
A
588 591anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
564 566first strand
Strand 2
A
569 573anti-parallel
Strand 3
A
579 581anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
629 631first strand
Strand 2
A
749 758anti-parallel
Strand 3
A
655 659anti-parallel
Strand 4
A
645 648anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
629 631first strand
Strand 2
A
749 758anti-parallel
Strand 3
A
678 687anti-parallel
Strand 4
A
721 728anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
641 642first strand
Strand 2
A
664 667anti-parallel
Strand 3
A
736 743anti-parallel
Strand 4
A
691 699anti-parallel
Strand 5
A
710 716anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
775 776first strand
Strand 2
A
783 788anti-parallel
Strand 3
A
821 827anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
805 811first strand
Strand 2
A
797 802anti-parallel
Strand 3
A
833 838anti-parallel
Strand 4
A
846 852anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
869 873first strand
Strand 2
A
886 889anti-parallel
Strand 3
A
927 929anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
913 916first strand
Strand 2
A
900 907anti-parallel
Strand 3
A
944 951anti-parallel
Strand 4
A
956 963anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il