Analysis of interatomic Contacts of Structural Units in PDB entry:
23DJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 23DJ entry

There is 1 chain in PDB entry 23DJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 103SER 1098
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 23DJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
108 123Right-handed alpha
Helix 2
AA2
A
124 128Right-handed 310
Helix 3
AA3
A
129 137Right-handed alpha
Helix 4
AA4
A
147 161Right-handed alpha
Helix 5
AA5
A
164 174Right-handed alpha
Helix 6
AA6
A
176 178Right-handed 310
Helix 7
AA7
A
179 186Right-handed alpha
Helix 8
AA8
A
203 215Right-handed alpha
Helix 9
AA9
A
236 241Right-handed 310
Helix 10
AB1
A
242 247Right-handed alpha
Helix 11
AB2
A
249 253Right-handed 310
Helix 12
AB3
A
255 259Right-handed 310
Helix 13
AB4
A
263 270Right-handed alpha
Helix 14
AB5
A
277 280Right-handed 310
Helix 15
AB6
A
281 297Right-handed alpha
Helix 16
AB7
A
309 329Right-handed alpha
Helix 17
AB8
A
333 337Right-handed 310
Helix 18
AB9
A
358 376Right-handed alpha
Helix 19
AC1
A
398 401Right-handed 310
Helix 20
AC2
A
402 414Right-handed alpha
Helix 21
AC3
A
414 422Right-handed alpha
Helix 22
AC4
A
434 447Right-handed alpha
Helix 23
AC5
A
465 477Right-handed alpha
Helix 24
AC6
A
514 518Right-handed 310
Helix 25
AC7
A
536 542Right-handed 310
Helix 26
AC8
A
545 554Right-handed alpha
Helix 27
AC9
A
561 565Right-handed alpha
Helix 28
AD1
A
565 570Right-handed alpha
Helix 29
AD2
A
576 584Right-handed alpha
Helix 30
AD3
A
593 596Right-handed 310
Helix 31
AD4
A
600 614Right-handed alpha
Helix 32
AD5
A
626 646Right-handed alpha
Helix 33
AD6
A
674 696Right-handed alpha
Helix 34
AD7
A
714 737Right-handed alpha
Helix 35
AD8
A
756 769Right-handed alpha
Helix 36
AD9
A
788 804Right-handed alpha
Helix 37
AE1
A
807 811Right-handed 310
Helix 38
AE2
A
814 823Right-handed alpha
Helix 39
AE3
A
837 840Right-handed 310
Helix 40
AE4
A
856 865Right-handed alpha
Helix 41
AE5
A
873 877Right-handed 310
Helix 42
AE6
A
916 921Right-handed alpha
Helix 43
AE7
A
922 927Right-handed alpha
Helix 44
AE8
A
931 936Right-handed alpha
Helix 45
AE9
A
948 960Right-handed alpha
Helix 46
AF1
A
966 970Right-handed 310
Helix 47
AF2
A
976 982Right-handed alpha
Helix 48
AF3
A
987 993Right-handed alpha
Helix 49
AF4
A
1051 1064Right-handed alpha
Helix 50
AF5
A
1066 1074Right-handed alpha
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There are 6 sheets in PDB entry 23DJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 347first strand
Strand 2
A
354 357anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 528first strand
Strand 2
A
483 486anti-parallel
Strand 3
A
556 560parallel
Strand 4
A
455 459parallel
Strand 5
A
587 591parallel
Strand 6
A
618 621parallel
Strand 7
A
423 427parallel
Strand 8
A
658 662parallel
Strand 9
A
667 671anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 706first strand
Strand 2
A
883 886parallel
Strand 3
A
849 852parallel
Strand 4
A
746 753parallel
Strand 5
A
739 740anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 706first strand
Strand 2
A
883 886parallel
Strand 3
A
849 852parallel
Strand 4
A
746 753parallel
Strand 5
A
828 835parallel
Strand 6
A
776 783parallel
Strand 7
A
1044 1046parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1027 1029first strand
Strand 2
A
1016 1020anti-parallel
Strand 3
A
1002 1007anti-parallel
Strand 4
A
1076 1079anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1035first strand
Strand 2
A
1085 1088parallel
Strand 3
A
1092 1095anti-parallel
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