Analysis of interatomic Contacts of Structural Units in PDB entry:
23VY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 23VY entry

There are 2 chains in PDB entry 23VY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 270ASN 1011
B
 MET 270LYS 1010
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 23VY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
270 287Right-handed alpha
Helix 2
AA2
A
291 298Right-handed alpha
Helix 3
AA3
A
304 313Right-handed alpha
Helix 4
AA4
A
315 340Right-handed alpha
Helix 5
AA5
A
348 368Right-handed alpha
Helix 6
AA6
A
387 395Right-handed 310
Helix 7
AA7
A
396 412Right-handed alpha
Helix 8
AA8
A
416 429Right-handed alpha
Helix 9
AA9
A
438 460Right-handed alpha
Helix 10
AB1
A
465 495Right-handed alpha
Helix 11
AB2
A
495 503Right-handed alpha
Helix 12
AB3
A
504 512Right-handed alpha
Helix 13
AB4
A
1001 1007Right-handed alpha
Helix 14
AB5
B
271 287Right-handed alpha
Helix 15
AB6
B
291 298Right-handed alpha
Helix 16
AB7
B
304 314Right-handed alpha
Helix 17
AB8
B
315 340Right-handed alpha
Helix 18
AB9
B
341 346Right-handed alpha
Helix 19
AC1
B
348 368Right-handed alpha
Helix 20
AC2
B
387 395Right-handed 310
Helix 21
AC3
B
396 412Right-handed alpha
Helix 22
AC4
B
416 429Right-handed alpha
Helix 23
AC5
B
438 460Right-handed alpha
Helix 24
AC6
B
463 465Right-handed 310
Helix 25
AC7
B
466 495Right-handed alpha
Helix 26
AC8
B
495 503Right-handed alpha
Helix 27
AC9
B
504 512Right-handed alpha
Helix 28
AD1
B
1001 1008Right-handed alpha
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There are 2 sheets in PDB entry 23VY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 373first strand
Strand 2
A
378 381anti-parallel
Strand 3
A
384 386anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 373first strand
Strand 2
B
378 381anti-parallel
Strand 3
B
384 386anti-parallel
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