Analysis of interatomic Contacts of Structural Units in PDB entry:
24BR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24BR entry

There are 2 chains in PDB entry 24BR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 43ARG 369
C
 U -3 U 0
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 24BR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 68Right-handed alpha
Helix 2
AA2
A
69 72Right-handed 310
Helix 3
AA3
A
81 87Right-handed alpha
Helix 4
AA4
A
100 102Right-handed 310
Helix 5
AA5
A
115 120Right-handed alpha
Helix 6
AA6
A
130 149Right-handed alpha
Helix 7
AA7
A
154 167Right-handed alpha
Helix 8
AA8
A
168 177Right-handed alpha
Helix 9
AA9
A
194 202Right-handed alpha
Helix 10
AB1
A
212 238Right-handed alpha
Helix 11
AB2
A
238 252Right-handed alpha
Helix 12
AB3
A
252 257Right-handed alpha
Helix 13
AB4
A
272 280Right-handed alpha
Helix 14
AB5
A
320 324Right-handed 310
Helix 15
AB6
A
327 336Right-handed alpha
Helix 16
AB7
A
354 368Right-handed alpha
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There are 2 sheets in PDB entry 24BR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
46 49parallel
Strand 3
A
90 92parallel
Strand 4
A
104 105parallel
Strand 5
A
98 99anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
291 295parallel
Strand 3
A
301 305anti-parallel
Strand 4
A
349 352anti-parallel
Strand 5
A
340 343anti-parallel
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