Analysis of interatomic Contacts of Structural Units in PDB entry:
24FL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24FL entry

There is 1 chain in PDB entry 24FL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LEU 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 24FL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
15 19Right-handed 310
Helix 3
AA3
A
29 36Right-handed alpha
Helix 4
AA4
A
36 44Right-handed alpha
Helix 5
AA5
A
73 76Right-handed 310
Helix 6
AA6
A
77 90Right-handed alpha
Helix 7
AA7
A
108 117Right-handed alpha
Helix 8
AA8
A
120 126Right-handed 310
Helix 9
AA9
A
169 186Right-handed alpha
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
202 206Right-handed 310
Helix 12
AB3
A
213 225Right-handed alpha
Helix 13
AB4
A
226 229Right-handed 310
Helix 14
AB5
A
241 250Right-handed alpha
Helix 15
AB6
A
251 254Right-handed 310
Helix 16
AB7
A
263 269Right-handed 310
Helix 17
AB8
A
283 298Right-handed alpha
Helix 18
AB9
A
316 322Right-handed alpha
Helix 19
AC1
A
327 341Right-handed alpha
Helix 20
AC2
A
351 355Right-handed 310
Helix 21
AC3
A
363 367Right-handed 310
Helix 22
AC4
A
369 380Right-handed alpha
Helix 23
AC5
A
385 397Right-handed alpha
Helix 24
AC6
A
398 401Right-handed 310
Helix 25
AC7
A
410 415Right-handed 310
Helix 26
AC8
A
426 431Right-handed 310
Helix 27
AC9
A
433 440Right-handed alpha
Helix 28
AD1
A
443 458Right-handed alpha
Helix 29
AD2
A
459 464Right-handed alpha
Helix 30
AD3
A
515 523Right-handed alpha
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There are 5 sheets in PDB entry 24FL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
258 260first strand
Strand 2
A
232 236parallel
Strand 3
A
190 193parallel
Strand 4
A
94 99parallel
Strand 5
A
47 50parallel
Strand 6
A
11 14parallel
Strand 7
A
345 349parallel
Strand 8
A
306 307parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
54 55first strand
Strand 2
A
67 71anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
128 129first strand
Strand 2
A
152 155anti-parallel
Strand 3
A
144 147anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
467 468first strand
Strand 2
A
475 482anti-parallel
Strand 3
A
485 492anti-parallel
Strand 4
A
530 535anti-parallel
Strand 5
A
506 512anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
498 499first strand
Strand 2
A
524 525anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il