Analysis of interatomic Contacts of Structural Units in PDB entry:
24IP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 24IP entry

There are 6 chains in PDB entry 24IP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ASN 7	SER 1216
C	SER 34	GLN 394
A	ASN 7	SER 1216
B	HIS 374	SER 826
F	SER 34	GLN 394
E	THR 375	SER 826

There are101 helices in PDB entry 24IP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	20	24	Right-handed 310
Helix 2	AA2	D	422	430	Right-handed 310
Helix 3	AA3	D	843	847	Right-handed 310
Helix 4	AA4	D	848	861	Right-handed alpha
Helix 5	AA5	D	871	875	Right-handed 310
Helix 6	AA6	D	880	893	Right-handed alpha
Helix 7	AA7	D	895	903	Right-handed alpha
Helix 8	AA8	D	908	921	Right-handed alpha
Helix 9	AA9	D	922	940	Right-handed alpha
Helix 10	AB1	D	972	990	Right-handed alpha
Helix 11	AB2	D	993	1008	Right-handed alpha
Helix 12	AB3	D	1009	1019	Right-handed alpha
Helix 13	AB4	D	1026	1038	Right-handed alpha
Helix 14	AB5	D	1044	1060	Right-handed alpha
Helix 15	AB6	D	1062	1073	Right-handed alpha
Helix 16	AB7	D	1075	1086	Right-handed alpha
Helix 17	AB8	D	1088	1100	Right-handed alpha
Helix 18	AB9	D	1101	1117	Right-handed alpha
Helix 19	AC1	D	1123	1135	Right-handed alpha
Helix 20	AC2	D	1136	1147	Right-handed alpha
Helix 21	AC3	D	1149	1164	Right-handed alpha
Helix 22	AC4	D	1172	1190	Right-handed alpha
Helix 23	AC5	D	1192	1204	Right-handed alpha
Helix 24	AC6	D	1207	1215	Right-handed alpha
Helix 25	AC7	C	86	99	Right-handed alpha
Helix 26	AC8	C	158	165	Right-handed alpha
Helix 27	AC9	C	165	179	Right-handed alpha
Helix 28	AD1	C	198	203	Right-handed alpha
Helix 29	AD2	C	205	213	Right-handed alpha
Helix 30	AD3	C	216	226	Right-handed alpha
Helix 31	AD4	C	236	251	Right-handed alpha
Helix 32	AD5	C	257	272	Right-handed alpha
Helix 33	AD6	C	293	305	Right-handed alpha
Helix 34	AD7	C	311	341	Right-handed alpha
Helix 35	AD8	C	343	358	Right-handed alpha
Helix 36	AD9	C	359	371	Right-handed alpha
Helix 37	AE1	C	374	394	Right-handed alpha
Helix 38	AE2	A	20	24	Right-handed 310
Helix 39	AE3	A	243	247	Right-handed 310
Helix 40	AE4	A	422	430	Right-handed 310
Helix 41	AE5	A	843	847	Right-handed 310
Helix 42	AE6	A	848	861	Right-handed alpha
Helix 43	AE7	A	871	875	Right-handed 310
Helix 44	AE8	A	880	893	Right-handed alpha
Helix 45	AE9	A	895	903	Right-handed alpha
Helix 46	AF1	A	908	921	Right-handed alpha
Helix 47	AF2	A	922	939	Right-handed alpha
Helix 48	AF3	A	972	990	Right-handed alpha
Helix 49	AF4	A	993	1008	Right-handed alpha
Helix 50	AF5	A	1009	1018	Right-handed alpha
Helix 51	AF6	A	1026	1040	Right-handed alpha
Helix 52	AF7	A	1044	1060	Right-handed alpha
Helix 53	AF8	A	1062	1071	Right-handed alpha
Helix 54	AF9	A	1072	1074	Right-handed 310
Helix 55	AG1	A	1075	1086	Right-handed alpha
Helix 56	AG2	A	1088	1100	Right-handed alpha
Helix 57	AG3	A	1101	1117	Right-handed alpha
Helix 58	AG4	A	1123	1135	Right-handed alpha
Helix 59	AG5	A	1136	1147	Right-handed alpha
Helix 60	AG6	A	1149	1164	Right-handed alpha
Helix 61	AG7	A	1172	1191	Right-handed alpha
Helix 62	AG8	A	1192	1204	Right-handed alpha
Helix 63	AG9	A	1207	1216	Right-handed alpha
Helix 64	AH1	B	383	391	Right-handed alpha
Helix 65	AH2	B	396	409	Right-handed alpha
Helix 66	AH3	B	413	415	Right-handed 310
Helix 67	AH4	B	416	426	Right-handed alpha
Helix 68	AH5	B	436	453	Right-handed alpha
Helix 69	AH6	B	479	484	Right-handed alpha
Helix 70	AH7	B	486	497	Right-handed alpha
Helix 71	AH8	B	526	530	Right-handed 310
Helix 72	AH9	B	531	543	Right-handed alpha
Helix 73	AI1	B	586	595	Right-handed alpha
Helix 74	AI2	B	637	647	Right-handed alpha
Helix 75	AI3	B	733	748	Right-handed alpha
Helix 76	AI4	B	751	777	Right-handed alpha
Helix 77	AI5	F	86	98	Right-handed alpha
Helix 78	AI6	F	158	163	Right-handed alpha
Helix 79	AI7	F	165	179	Right-handed alpha
Helix 80	AI8	F	206	211	Right-handed alpha
Helix 81	AI9	F	216	226	Right-handed alpha
Helix 82	AJ1	F	236	250	Right-handed alpha
Helix 83	AJ2	F	257	271	Right-handed alpha
Helix 84	AJ3	F	293	306	Right-handed alpha
Helix 85	AJ4	F	313	341	Right-handed alpha
Helix 86	AJ5	F	343	357	Right-handed alpha
Helix 87	AJ6	F	359	372	Right-handed alpha
Helix 88	AJ7	F	374	394	Right-handed alpha
Helix 89	AJ8	E	383	391	Right-handed alpha
Helix 90	AJ9	E	396	409	Right-handed alpha
Helix 91	AK1	E	416	426	Right-handed alpha
Helix 92	AK2	E	436	453	Right-handed alpha
Helix 93	AK3	E	479	483	Right-handed alpha
Helix 94	AK4	E	486	497	Right-handed alpha
Helix 95	AK5	E	526	530	Right-handed 310
Helix 96	AK6	E	531	543	Right-handed alpha
Helix 97	AK7	E	561	566	Right-handed alpha
Helix 98	AK8	E	586	595	Right-handed alpha
Helix 99	AK9	E	637	647	Right-handed alpha
Helix 100	AL1	E	733	748	Right-handed alpha
Helix 101	AL2	E	751	777	Right-handed alpha

There are 40 sheets in PDB entry 24IP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	15	first strand
Strand 2	D	818	822	anti-parallel
Strand 3	D	808	813	anti-parallel
Strand 4	D	798	803	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	29	first strand
Strand 2	D	34	38	anti-parallel
Strand 3	D	43	47	anti-parallel
Strand 4	D	53	57	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	69	first strand
Strand 2	D	86	90	anti-parallel
Strand 3	D	94	99	anti-parallel
Strand 4	D	104	110	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	121	first strand
Strand 2	D	131	135	anti-parallel
Strand 3	D	140	145	anti-parallel
Strand 4	D	151	156	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	166	first strand
Strand 2	D	174	177	anti-parallel
Strand 3	D	182	185	anti-parallel
Strand 4	D	199	203	anti-parallel
Strand 5	D	234	235	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	252	first strand
Strand 2	D	259	263	anti-parallel
Strand 3	D	267	272	anti-parallel
Strand 4	D	277	283	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	291	296	first strand
Strand 2	D	302	307	anti-parallel
Strand 3	D	312	317	anti-parallel
Strand 4	D	341	346	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	358	363	first strand
Strand 2	D	370	375	anti-parallel
Strand 3	D	380	389	anti-parallel
Strand 4	D	450	460	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	410	first strand
Strand 2	D	413	414	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	469	472	first strand
Strand 2	D	487	491	anti-parallel
Strand 3	D	496	501	anti-parallel
Strand 4	D	506	512	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	518	523	first strand
Strand 2	D	528	533	anti-parallel
Strand 3	D	547	551	anti-parallel
Strand 4	D	557	559	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	571	576	first strand
Strand 2	D	582	587	anti-parallel
Strand 3	D	593	596	anti-parallel
Strand 4	D	602	605	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	615	618	first strand
Strand 2	D	676	683	anti-parallel
Strand 3	D	686	694	anti-parallel
Strand 4	D	700	704	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	713	719	first strand
Strand 2	D	722	727	anti-parallel
Strand 3	D	732	736	anti-parallel
Strand 4	D	741	742	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	752	757	first strand
Strand 2	D	765	770	anti-parallel
Strand 3	D	773	778	anti-parallel
Strand 4	D	784	789	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	111	first strand
Strand 2	C	124	126	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	232	first strand
Strand 2	C	276	278	parallel
Strand 3	C	287	288	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	A	818	822	anti-parallel
Strand 3	A	808	813	anti-parallel
Strand 4	A	798	805	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	29	first strand
Strand 2	A	34	37	anti-parallel
Strand 3	A	43	47	anti-parallel
Strand 4	A	52	57	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	69	first strand
Strand 2	A	85	90	anti-parallel
Strand 3	A	94	99	anti-parallel
Strand 4	A	104	110	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	121	first strand
Strand 2	A	131	135	anti-parallel
Strand 3	A	140	145	anti-parallel
Strand 4	A	151	156	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	166	first strand
Strand 2	A	174	177	anti-parallel
Strand 3	A	182	185	anti-parallel
Strand 4	A	199	201	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	252	first strand
Strand 2	A	259	264	anti-parallel
Strand 3	A	267	272	anti-parallel
Strand 4	A	277	283	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	296	first strand
Strand 2	A	302	307	anti-parallel
Strand 3	A	312	317	anti-parallel
Strand 4	A	341	346	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	363	first strand
Strand 2	A	370	375	anti-parallel
Strand 3	A	380	389	anti-parallel
Strand 4	A	450	460	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	410	first strand
Strand 2	A	413	414	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	472	first strand
Strand 2	A	487	491	anti-parallel
Strand 3	A	496	501	anti-parallel
Strand 4	A	506	512	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	528	534	anti-parallel
Strand 3	A	545	551	anti-parallel
Strand 4	A	557	559	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	576	first strand
Strand 2	A	582	587	anti-parallel
Strand 3	A	593	596	anti-parallel
Strand 4	A	602	605	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	615	618	first strand
Strand 2	A	677	682	anti-parallel
Strand 3	A	688	694	anti-parallel
Strand 4	A	697	704	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	719	first strand
Strand 2	A	722	727	anti-parallel
Strand 3	A	732	736	anti-parallel
Strand 4	A	741	745	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	754	757	first strand
Strand 2	A	765	769	anti-parallel
Strand 3	A	773	778	anti-parallel
Strand 4	A	783	789	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	412	first strand
Strand 2	B	474	478	anti-parallel
Strand 3	B	377	382	parallel
Strand 4	B	498	503	parallel
Strand 5	B	521	522	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	583	first strand
Strand 2	B	569	574	anti-parallel
Strand 3	B	600	606	anti-parallel
Strand 4	B	548	551	anti-parallel
Strand 5	B	812	814	anti-parallel
Strand 6	B	819	821	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	612	617	first strand
Strand 2	B	654	660	anti-parallel
Strand 3	B	721	727	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	110	first strand
Strand 2	F	125	126	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	277	278	first strand
Strand 2	F	287	288	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	411	412	first strand
Strand 2	E	474	478	anti-parallel
Strand 3	E	377	382	parallel
Strand 4	E	498	503	parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	579	583	first strand
Strand 2	E	569	574	anti-parallel
Strand 3	E	600	606	anti-parallel
Strand 4	E	548	551	anti-parallel
Strand 5	E	812	814	anti-parallel
Strand 6	E	819	821	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	612	616	first strand
Strand 2	E	654	660	anti-parallel
Strand 3	E	721	727	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 24IP

Analysis of interatomic Contacts of Structural Units in PDB entry:
24IP