Analysis of interatomic Contacts of Structural Units in PDB entry:
24MP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24MP entry

There are 2 chains in PDB entry 24MP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7ILE 173
B
 ARG 9ILE 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 24MP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
33 44Right-handed alpha
Helix 3
AA3
A
52 57Right-handed 310
Helix 4
AA4
A
58 61Right-handed 310
Helix 5
AA5
A
71 78Right-handed alpha
Helix 6
AA6
A
87 99Right-handed 310
Helix 7
AA7
A
100 116Right-handed alpha
Helix 8
AA8
A
116 133Right-handed alpha
Helix 9
AA9
A
136 155Right-handed alpha
Helix 10
AB1
A
156 161Right-handed 310
Helix 11
AB2
A
170 173Right-handed 310
Helix 12
AB3
B
19 30Right-handed alpha
Helix 13
AB4
B
33 44Right-handed alpha
Helix 14
AB5
B
52 57Right-handed 310
Helix 15
AB6
B
58 61Right-handed 310
Helix 16
AB7
B
71 78Right-handed alpha
Helix 17
AB8
B
87 94Right-handed 310
Helix 18
AB9
B
95 100Right-handed alpha
Helix 19
AC1
B
100 116Right-handed alpha
Helix 20
AC2
B
116 133Right-handed alpha
Helix 21
AC3
B
136 155Right-handed alpha
Helix 22
AC4
B
156 161Right-handed 310
Helix 23
AC5
B
170 173Right-handed 310
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There are 4 sheets in PDB entry 24MP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 16first strand
Strand 2
A
164 168anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
69 70anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
164 168anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
69 70anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il