Analysis of interatomic Contacts of Structural Units in PDB entry:
24NE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24NE entry

There is 1 chain in PDB entry 24NE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 21LYS 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 24NE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
156 158Right-handed 310
Helix 2
AA2
A
208 211Right-handed 310
Helix 3
AA3
A
232 239Right-handed alpha
Helix 4
AA4
A
240 242Right-handed 310
Helix 5
AA5
A
254 266Right-handed alpha
Helix 6
AA6
A
267 269Right-handed 310
Helix 7
AA7
A
277 292Right-handed alpha
Helix 8
AA8
A
293 309Right-handed alpha
Helix 9
AA9
A
481 491Right-handed alpha
Helix 10
AB1
A
510 541Right-handed alpha
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There are 5 sheets in PDB entry 24NE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
66 70anti-parallel
Strand 3
A
54 56anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
85 87anti-parallel
Strand 3
A
78 80anti-parallel
Strand 4
A
201 206anti-parallel
Strand 5
A
191 196anti-parallel
Strand 6
A
182 188anti-parallel
Strand 7
A
171 177anti-parallel
Strand 8
A
165 168anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
140 145anti-parallel
Strand 3
A
129 137anti-parallel
Strand 4
A
113 120anti-parallel
Strand 5
A
100 107anti-parallel
Strand 6
A
214 215anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
324 326anti-parallel
Strand 3
A
316 320anti-parallel
Strand 4
A
434 438anti-parallel
Strand 5
A
424 428anti-parallel
Strand 6
A
414 419anti-parallel
Strand 7
A
405 410anti-parallel
Strand 8
A
400 402anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
388 391anti-parallel
Strand 3
A
378 383anti-parallel
Strand 4
A
365 375anti-parallel
Strand 5
A
353 362anti-parallel
Strand 6
A
342 347anti-parallel
Strand 7
A
446 447anti-parallel
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