Analysis of interatomic Contacts of Structural Units in PDB entry:
24PI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 24PI entry

There are 3 chains in PDB entry 24PI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 6	LEU 559
B	GLU 6	LEU 559
C	GLU 6	ARG 233

There are122 helices in PDB entry 24PI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	24	Right-handed alpha
Helix 2	AA2	A	37	44	Right-handed alpha
Helix 3	AA3	A	56	72	Right-handed alpha
Helix 4	AA4	A	82	87	Right-handed alpha
Helix 5	AA5	A	87	99	Right-handed alpha
Helix 6	AA6	A	110	114	Right-handed 310
Helix 7	AA7	A	123	129	Right-handed alpha
Helix 8	AA8	A	130	132	Right-handed 310
Helix 9	AA9	A	140	142	Right-handed 310
Helix 10	AB1	A	143	157	Right-handed alpha
Helix 11	AB2	A	169	174	Right-handed alpha
Helix 12	AB3	A	193	207	Right-handed alpha
Helix 13	AB4	A	220	235	Right-handed alpha
Helix 14	AB5	A	242	245	Right-handed 310
Helix 15	AB6	A	249	254	Right-handed 310
Helix 16	AB7	A	266	274	Right-handed alpha
Helix 17	AB8	A	289	294	Right-handed alpha
Helix 18	AB9	A	323	334	Right-handed alpha
Helix 19	AC1	A	342	363	Right-handed alpha
Helix 20	AC2	A	364	366	Right-handed 310
Helix 21	AC3	A	372	385	Right-handed alpha
Helix 22	AC4	A	395	405	Right-handed alpha
Helix 23	AC5	A	424	436	Right-handed alpha
Helix 24	AC6	A	447	454	Right-handed alpha
Helix 25	AC7	A	455	464	Right-handed alpha
Helix 26	AC8	A	477	489	Right-handed alpha
Helix 27	AC9	A	500	508	Right-handed alpha
Helix 28	AD1	A	517	519	Right-handed 310
Helix 29	AD2	A	520	530	Right-handed alpha
Helix 30	AD3	A	542	551	Right-handed 310
Helix 31	AD4	A	554	559	Right-handed alpha
Helix 32	AD5	B	12	25	Right-handed alpha
Helix 33	AD6	B	37	46	Right-handed alpha
Helix 34	AD7	B	56	72	Right-handed alpha
Helix 35	AD8	B	82	87	Right-handed alpha
Helix 36	AD9	B	88	99	Right-handed alpha
Helix 37	AE1	B	110	114	Right-handed 310
Helix 38	AE2	B	123	129	Right-handed alpha
Helix 39	AE3	B	130	132	Right-handed 310
Helix 40	AE4	B	140	142	Right-handed 310
Helix 41	AE5	B	143	157	Right-handed alpha
Helix 42	AE6	B	169	174	Right-handed alpha
Helix 43	AE7	B	193	207	Right-handed alpha
Helix 44	AE8	B	220	235	Right-handed alpha
Helix 45	AE9	B	242	245	Right-handed 310
Helix 46	AF1	B	249	254	Right-handed 310
Helix 47	AF2	B	266	275	Right-handed alpha
Helix 48	AF3	B	289	294	Right-handed alpha
Helix 49	AF4	B	323	335	Right-handed alpha
Helix 50	AF5	B	342	363	Right-handed alpha
Helix 51	AF6	B	364	366	Right-handed 310
Helix 52	AF7	B	372	386	Right-handed alpha
Helix 53	AF8	B	395	405	Right-handed alpha
Helix 54	AF9	B	424	436	Right-handed alpha
Helix 55	AG1	B	447	454	Right-handed alpha
Helix 56	AG2	B	455	463	Right-handed alpha
Helix 57	AG3	B	477	489	Right-handed alpha
Helix 58	AG4	B	500	508	Right-handed alpha
Helix 59	AG5	B	520	530	Right-handed alpha
Helix 60	AG6	B	542	551	Right-handed 310
Helix 61	AG7	B	554	558	Right-handed 310
Helix 62	AG8	C	12	24	Right-handed alpha
Helix 63	AG9	C	37	44	Right-handed alpha
Helix 64	AH1	C	56	72	Right-handed alpha
Helix 65	AH2	C	82	87	Right-handed alpha
Helix 66	AH3	C	88	98	Right-handed alpha
Helix 67	AH4	C	110	114	Right-handed 310
Helix 68	AH5	C	123	129	Right-handed alpha
Helix 69	AH6	C	130	132	Right-handed 310
Helix 70	AH7	C	140	142	Right-handed 310
Helix 71	AH8	C	143	157	Right-handed alpha
Helix 72	AH9	C	169	174	Right-handed alpha
Helix 73	AI1	C	193	206	Right-handed alpha
Helix 74	AI2	C	220	235	Right-handed alpha
Helix 75	AI3	C	242	245	Right-handed 310
Helix 76	AI4	C	249	254	Right-handed 310
Helix 77	AI5	C	266	275	Right-handed alpha
Helix 78	AI6	C	289	293	Right-handed 310
Helix 79	AI7	C	323	334	Right-handed alpha
Helix 80	AI8	C	342	363	Right-handed alpha
Helix 81	AI9	C	364	366	Right-handed 310
Helix 82	AJ1	C	372	386	Right-handed alpha
Helix 83	AJ2	C	395	405	Right-handed alpha
Helix 84	AJ3	C	424	436	Right-handed alpha
Helix 85	AJ4	C	447	452	Right-handed alpha
Helix 86	AJ5	C	455	463	Right-handed alpha
Helix 87	AJ6	C	477	489	Right-handed alpha
Helix 88	AJ7	C	500	508	Right-handed alpha
Helix 89	AJ8	C	517	519	Right-handed 310
Helix 90	AJ9	C	520	530	Right-handed alpha
Helix 91	AK1	C	545	550	Right-handed 310
Helix 92	AK2	C	554	558	Right-handed 310
Helix 93	AK3	D	12	24	Right-handed alpha
Helix 94	AK4	D	37	47	Right-handed alpha
Helix 95	AK5	D	56	72	Right-handed alpha
Helix 96	AK6	D	82	87	Right-handed alpha
Helix 97	AK7	D	88	98	Right-handed alpha
Helix 98	AK8	D	110	114	Right-handed 310
Helix 99	AK9	D	123	129	Right-handed alpha
Helix 100	AL1	D	130	132	Right-handed 310
Helix 101	AL2	D	140	142	Right-handed 310
Helix 102	AL3	D	143	157	Right-handed alpha
Helix 103	AL4	D	169	174	Right-handed alpha
Helix 104	AL5	D	193	206	Right-handed alpha
Helix 105	AL6	D	216	219	Right-handed 310
Helix 106	AL7	D	220	235	Right-handed alpha
Helix 107	AL8	D	242	245	Right-handed 310
Helix 108	AL9	D	249	254	Right-handed 310
Helix 109	AM1	D	266	275	Right-handed alpha
Helix 110	AM2	D	289	293	Right-handed 310
Helix 111	AM3	D	323	334	Right-handed alpha
Helix 112	AM4	D	342	363	Right-handed alpha
Helix 113	AM5	D	372	386	Right-handed alpha
Helix 114	AM6	D	395	405	Right-handed alpha
Helix 115	AM7	D	424	436	Right-handed alpha
Helix 116	AM8	D	447	454	Right-handed alpha
Helix 117	AM9	D	455	463	Right-handed alpha
Helix 118	AN1	D	477	489	Right-handed alpha
Helix 119	AN2	D	500	508	Right-handed alpha
Helix 120	AN3	D	520	531	Right-handed alpha
Helix 121	AN4	D	542	551	Right-handed 310
Helix 122	AN5	D	554	559	Right-handed alpha

There are 16 sheets in PDB entry 24PI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	10	first strand
Strand 2	A	176	177	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	53	first strand
Strand 2	A	28	32	parallel
Strand 3	A	75	79	parallel
Strand 4	A	102	108	parallel
Strand 5	A	162	168	parallel
Strand 6	A	134	137	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	259	first strand
Strand 2	A	238	240	parallel
Strand 3	A	210	214	parallel
Strand 4	A	277	281	parallel
Strand 5	A	299	304	parallel
Strand 6	A	318	321	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	414	first strand
Strand 2	A	389	392	parallel
Strand 3	A	441	446	parallel
Strand 4	A	467	473	parallel
Strand 5	A	535	540	parallel
Strand 6	A	511	514	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	10	first strand
Strand 2	B	176	178	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	53	first strand
Strand 2	B	28	32	parallel
Strand 3	B	75	79	parallel
Strand 4	B	102	108	parallel
Strand 5	B	162	168	parallel
Strand 6	B	134	137	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	259	first strand
Strand 2	B	238	240	parallel
Strand 3	B	210	214	parallel
Strand 4	B	277	281	parallel
Strand 5	B	299	304	parallel
Strand 6	B	318	321	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	414	first strand
Strand 2	B	389	392	parallel
Strand 3	B	441	446	parallel
Strand 4	B	467	473	parallel
Strand 5	B	535	540	parallel
Strand 6	B	511	514	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	10	first strand
Strand 2	C	176	177	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	53	first strand
Strand 2	C	28	32	parallel
Strand 3	C	75	79	parallel
Strand 4	C	102	108	parallel
Strand 5	C	162	168	parallel
Strand 6	C	134	137	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	259	first strand
Strand 2	C	238	240	parallel
Strand 3	C	210	214	parallel
Strand 4	C	277	281	parallel
Strand 5	C	299	304	parallel
Strand 6	C	318	321	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	414	first strand
Strand 2	C	389	392	parallel
Strand 3	C	441	446	parallel
Strand 4	C	467	473	parallel
Strand 5	C	535	540	parallel
Strand 6	C	511	514	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	10	first strand
Strand 2	D	176	177	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	53	first strand
Strand 2	D	28	32	parallel
Strand 3	D	75	79	parallel
Strand 4	D	102	108	parallel
Strand 5	D	162	168	parallel
Strand 6	D	134	137	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	259	first strand
Strand 2	D	238	240	parallel
Strand 3	D	210	214	parallel
Strand 4	D	277	281	parallel
Strand 5	D	299	304	parallel
Strand 6	D	318	321	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	415	first strand
Strand 2	D	389	392	parallel
Strand 3	D	441	446	parallel
Strand 4	D	467	473	parallel
Strand 5	D	535	540	parallel
Strand 6	D	511	514	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 24PI

Analysis of interatomic Contacts of Structural Units in PDB entry:
24PI