Analysis of interatomic Contacts of Structural Units in PDB entry:
24QI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24QI entry

There is 1 chain in PDB entry 24QI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 25THR 599
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 24QI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 47Right-handed alpha
Helix 2
AA2
A
152 156Right-handed 310
Helix 3
AA3
A
165 180Right-handed alpha
Helix 4
AA4
A
506 508Right-handed 310
Helix 5
AA5
A
512 516Right-handed 310
Helix 6
AA6
A
526 531Right-handed 310
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There are 10 sheets in PDB entry 24QI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
81 83anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
105 110parallel
Strand 3
A
118 124anti-parallel
Strand 4
A
141 144anti-parallel
Strand 5
A
137 138anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 164first strand
Strand 2
A
188 191parallel
Strand 3
A
202 214parallel
Strand 4
A
257 265parallel
Strand 5
A
287 294parallel
Strand 6
A
309 316parallel
Strand 7
A
350 354parallel
Strand 8
A
372 376parallel
Strand 9
A
402 404parallel
Strand 10
A
430 431parallel
Strand 11
A
461 462parallel
Strand 12
A
488 489parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
202 214parallel
Strand 3
A
257 265parallel
Strand 4
A
287 294parallel
Strand 5
A
309 316parallel
Strand 6
A
345 347parallel
Strand 7
A
367 369parallel
Strand 8
A
394 399parallel
Strand 9
A
422 427parallel
Strand 10
A
453 458parallel
Strand 11
A
481 485parallel
Strand 12
A
501 504parallel
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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
241 246parallel
Strand 3
A
274 279parallel
Strand 4
A
296 302parallel
Strand 5
A
328 332parallel
Strand 6
A
356 361parallel
Strand 7
A
386 391parallel
Strand 8
A
409 415parallel
Strand 9
A
445 451parallel
Strand 10
A
471 477parallel
Strand 11
A
495 496parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
234 235anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
282 284parallel
Strand 3
A
304 306parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 320first strand
Strand 2
A
323 324anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 407first strand
Strand 2
A
435 436parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 545first strand
Strand 2
A
556 566anti-parallel
Strand 3
A
569 576anti-parallel
Strand 4
A
581 587anti-parallel
Strand 5
A
597 598anti-parallel
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