Analysis of interatomic Contacts of Structural Units in PDB entry:
24QJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24QJ entry

There is 1 chain in PDB entry 24QJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 227PRO 701
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 24QJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
264 268Right-handed 310
Helix 2
AA2
A
275 281Right-handed alpha
Helix 3
AA3
A
287 290Right-handed 310
Helix 4
AA4
A
298 310Right-handed alpha
Helix 5
AA5
A
311 313Right-handed 310
Helix 6
AA6
A
338 341Right-handed 310
Helix 7
AA7
A
368 373Right-handed 310
Helix 8
AA8
A
409 414Right-handed alpha
Helix 9
AA9
A
415 417Right-handed 310
Helix 10
AB1
A
643 647Right-handed 310
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There are 8 sheets in PDB entry 24QJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
240 243anti-parallel
Strand 3
A
259 261anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
316 317parallel
Strand 3
A
322 323anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 348first strand
Strand 2
A
380 385parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
465 468anti-parallel
Strand 3
A
422 426anti-parallel
Strand 4
A
431 440anti-parallel
Strand 5
A
443 446anti-parallel
Strand 6
A
404 406anti-parallel
Strand 7
A
399 400anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
465 468anti-parallel
Strand 3
A
422 426anti-parallel
Strand 4
A
431 440anti-parallel
Strand 5
A
450 451anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
585 590first strand
Strand 2
A
596 601anti-parallel
Strand 3
A
606 607anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 615first strand
Strand 2
A
627 630parallel
Strand 3
A
651 656parallel
Strand 4
A
683 688anti-parallel
Strand 5
A
693 699anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 640first strand
Strand 2
A
663 666parallel
Strand 3
A
677 678anti-parallel
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