Analysis of interatomic Contacts of Structural Units in PDB entry:
24RQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 24RQ entry

There are 4 chains in PDB entry 24RQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 43	HIS 431
B	ALA 43	HIS 431
C	ALA 43	HIS 431
D	ALA 43	HIS 431

There are 62 helices in PDB entry 24RQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	88	109	Right-handed alpha
Helix 2	AA2	A	145	148	Right-handed 310
Helix 3	AA3	A	153	157	Right-handed 310
Helix 4	AA4	A	173	177	Right-handed 310
Helix 5	AA5	A	189	204	Right-handed alpha
Helix 6	AA6	A	250	258	Right-handed alpha
Helix 7	AA7	A	261	265	Right-handed 310
Helix 8	AA8	A	267	271	Right-handed 310
Helix 9	AA9	A	284	290	Right-handed alpha
Helix 10	AB1	A	292	301	Right-handed alpha
Helix 11	AB2	A	320	324	Right-handed 310
Helix 12	AB3	A	334	340	Right-handed alpha
Helix 13	AB4	A	343	350	Right-handed 310
Helix 14	AB5	A	384	393	Right-handed alpha
Helix 15	AB6	A	395	399	Right-handed 310
Helix 16	AB7	A	423	429	Right-handed alpha
Helix 17	AB8	B	88	109	Right-handed alpha
Helix 18	AB9	B	145	148	Right-handed 310
Helix 19	AC1	B	153	157	Right-handed 310
Helix 20	AC2	B	173	177	Right-handed 310
Helix 21	AC3	B	189	204	Right-handed alpha
Helix 22	AC4	B	250	258	Right-handed alpha
Helix 23	AC5	B	261	265	Right-handed 310
Helix 24	AC6	B	267	271	Right-handed 310
Helix 25	AC7	B	284	290	Right-handed alpha
Helix 26	AC8	B	292	301	Right-handed alpha
Helix 27	AC9	B	320	324	Right-handed 310
Helix 28	AD1	B	334	340	Right-handed alpha
Helix 29	AD2	B	343	350	Right-handed 310
Helix 30	AD3	B	384	393	Right-handed alpha
Helix 31	AD4	B	395	399	Right-handed 310
Helix 32	AD5	B	423	429	Right-handed alpha
Helix 33	AD6	C	88	109	Right-handed alpha
Helix 34	AD7	C	145	148	Right-handed 310
Helix 35	AD8	C	153	157	Right-handed 310
Helix 36	AD9	C	173	177	Right-handed 310
Helix 37	AE1	C	189	204	Right-handed alpha
Helix 38	AE2	C	250	258	Right-handed alpha
Helix 39	AE3	C	267	271	Right-handed 310
Helix 40	AE4	C	284	290	Right-handed alpha
Helix 41	AE5	C	292	301	Right-handed alpha
Helix 42	AE6	C	320	324	Right-handed 310
Helix 43	AE7	C	334	340	Right-handed alpha
Helix 44	AE8	C	344	350	Right-handed 310
Helix 45	AE9	C	384	393	Right-handed alpha
Helix 46	AF1	C	395	399	Right-handed 310
Helix 47	AF2	C	423	430	Right-handed alpha
Helix 48	AF3	D	88	109	Right-handed alpha
Helix 49	AF4	D	145	148	Right-handed 310
Helix 50	AF5	D	153	157	Right-handed 310
Helix 51	AF6	D	173	177	Right-handed 310
Helix 52	AF7	D	189	204	Right-handed alpha
Helix 53	AF8	D	250	258	Right-handed alpha
Helix 54	AF9	D	261	265	Right-handed 310
Helix 55	AG1	D	267	271	Right-handed 310
Helix 56	AG2	D	284	290	Right-handed alpha
Helix 57	AG3	D	292	301	Right-handed alpha
Helix 58	AG4	D	334	340	Right-handed alpha
Helix 59	AG5	D	344	350	Right-handed 310
Helix 60	AG6	D	384	393	Right-handed alpha
Helix 61	AG7	D	395	399	Right-handed 310
Helix 62	AG8	D	423	429	Right-handed alpha

There are 9 sheets in PDB entry 24RQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	353	first strand
Strand 2	A	368	378	anti-parallel
Strand 3	A	356	362	anti-parallel
Strand 4	A	208	217	anti-parallel
Strand 5	A	76	84	anti-parallel
Strand 6	A	181	187	anti-parallel
Strand 7	A	137	143	anti-parallel
Strand 8	A	401	411	anti-parallel
Strand 9	A	274	283	anti-parallel
Strand 10	A	368	378	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	130	131	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	353	first strand
Strand 2	B	368	378	anti-parallel
Strand 3	B	356	362	anti-parallel
Strand 4	B	208	217	anti-parallel
Strand 5	B	76	84	anti-parallel
Strand 6	B	181	187	anti-parallel
Strand 7	B	137	143	anti-parallel
Strand 8	B	401	411	anti-parallel
Strand 9	B	274	283	anti-parallel
Strand 10	B	368	378	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	130	131	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	234	first strand
Strand 2	B	240	241	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	353	first strand
Strand 2	C	368	378	anti-parallel
Strand 3	C	356	362	anti-parallel
Strand 4	C	208	217	anti-parallel
Strand 5	C	76	84	anti-parallel
Strand 6	C	181	187	anti-parallel
Strand 7	C	137	143	anti-parallel
Strand 8	C	401	411	anti-parallel
Strand 9	C	274	283	anti-parallel
Strand 10	C	368	378	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	130	131	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	352	353	first strand
Strand 2	D	368	378	anti-parallel
Strand 3	D	356	362	anti-parallel
Strand 4	D	208	217	anti-parallel
Strand 5	D	76	84	anti-parallel
Strand 6	D	181	187	anti-parallel
Strand 7	D	137	143	anti-parallel
Strand 8	D	401	411	anti-parallel
Strand 9	D	274	283	anti-parallel
Strand 10	D	368	378	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	111	first strand
Strand 2	D	130	131	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 24RQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
24RQ