Analysis of interatomic Contacts of Structural Units in PDB entry:
24TG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 24TG entry

There are 4 chains in PDB entry 24TG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 26	HIS 504
B	ALA 27	ALA 494
C	ARG 26	ALA 494
D	ARG 26	LEU 493

There are 60 helices in PDB entry 24TG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	57	Right-handed alpha
Helix 2	AA2	A	59	68	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	138	151	Right-handed alpha
Helix 5	AA5	A	163	167	Right-handed 310
Helix 6	AA6	A	183	185	Right-handed 310
Helix 7	AA7	A	186	205	Right-handed alpha
Helix 8	AA8	A	235	253	Right-handed alpha
Helix 9	AA9	A	267	278	Right-handed alpha
Helix 10	AB1	A	279	286	Right-handed alpha
Helix 11	AB2	A	300	309	Right-handed alpha
Helix 12	AB3	A	328	342	Right-handed alpha
Helix 13	AB4	A	356	360	Right-handed 310
Helix 14	AB5	A	375	386	Right-handed alpha
Helix 15	AB6	A	440	444	Right-handed 310
Helix 16	AB7	A	492	498	Right-handed alpha
Helix 17	AB8	B	49	57	Right-handed alpha
Helix 18	AB9	B	59	68	Right-handed alpha
Helix 19	AC1	B	111	115	Right-handed 310
Helix 20	AC2	B	138	151	Right-handed alpha
Helix 21	AC3	B	163	167	Right-handed 310
Helix 22	AC4	B	183	185	Right-handed 310
Helix 23	AC5	B	186	205	Right-handed alpha
Helix 24	AC6	B	235	253	Right-handed alpha
Helix 25	AC7	B	267	278	Right-handed alpha
Helix 26	AC8	B	279	285	Right-handed alpha
Helix 27	AC9	B	300	309	Right-handed alpha
Helix 28	AD1	B	328	342	Right-handed alpha
Helix 29	AD2	B	356	360	Right-handed 310
Helix 30	AD3	B	375	386	Right-handed alpha
Helix 31	AD4	B	440	444	Right-handed 310
Helix 32	AD5	C	49	57	Right-handed alpha
Helix 33	AD6	C	59	68	Right-handed alpha
Helix 34	AD7	C	111	115	Right-handed 310
Helix 35	AD8	C	138	151	Right-handed alpha
Helix 36	AD9	C	163	167	Right-handed 310
Helix 37	AE1	C	183	185	Right-handed 310
Helix 38	AE2	C	186	205	Right-handed alpha
Helix 39	AE3	C	235	252	Right-handed alpha
Helix 40	AE4	C	267	278	Right-handed alpha
Helix 41	AE5	C	279	286	Right-handed alpha
Helix 42	AE6	C	300	309	Right-handed alpha
Helix 43	AE7	C	328	342	Right-handed alpha
Helix 44	AE8	C	356	360	Right-handed 310
Helix 45	AE9	C	375	386	Right-handed alpha
Helix 46	AF1	C	440	444	Right-handed 310
Helix 47	AF2	D	49	57	Right-handed alpha
Helix 48	AF3	D	59	68	Right-handed alpha
Helix 49	AF4	D	111	115	Right-handed 310
Helix 50	AF5	D	138	151	Right-handed alpha
Helix 51	AF6	D	163	167	Right-handed 310
Helix 52	AF7	D	183	185	Right-handed 310
Helix 53	AF8	D	186	205	Right-handed alpha
Helix 54	AF9	D	235	253	Right-handed alpha
Helix 55	AG1	D	267	278	Right-handed alpha
Helix 56	AG2	D	279	286	Right-handed alpha
Helix 57	AG3	D	300	309	Right-handed alpha
Helix 58	AG4	D	328	342	Right-handed alpha
Helix 59	AG5	D	356	360	Right-handed 310
Helix 60	AG6	D	375	386	Right-handed alpha

There are 24 sheets in PDB entry 24TG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	32	first strand
Strand 2	A	425	430	parallel
Strand 3	A	471	476	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	41	first strand
Strand 2	A	393	396	anti-parallel
Strand 3	A	402	407	anti-parallel
Strand 4	A	412	418	anti-parallel
Strand 5	A	480	487	anti-parallel
Strand 6	A	446	451	anti-parallel
Strand 7	A	460	462	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	48	first strand
Strand 2	A	86	91	parallel
Strand 3	A	154	159	parallel
Strand 4	A	211	213	parallel
Strand 5	A	259	265	parallel
Strand 6	A	288	292	parallel
Strand 7	A	315	321	parallel
Strand 8	A	346	349	parallel
Strand 9	A	44	48	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	78	80	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	354	first strand
Strand 2	A	362	364	parallel
Strand 3	A	371	374	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	437	first strand
Strand 2	A	489	490	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	32	first strand
Strand 2	B	425	430	parallel
Strand 3	B	471	476	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	41	first strand
Strand 2	B	393	396	anti-parallel
Strand 3	B	402	407	anti-parallel
Strand 4	B	412	418	anti-parallel
Strand 5	B	480	487	anti-parallel
Strand 6	B	446	451	anti-parallel
Strand 7	B	460	462	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	48	first strand
Strand 2	B	86	91	parallel
Strand 3	B	154	159	parallel
Strand 4	B	211	213	parallel
Strand 5	B	259	265	parallel
Strand 6	B	288	292	parallel
Strand 7	B	315	321	parallel
Strand 8	B	346	349	parallel
Strand 9	B	44	48	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	74	first strand
Strand 2	B	77	80	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	354	first strand
Strand 2	B	362	364	parallel
Strand 3	B	371	374	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	437	first strand
Strand 2	B	489	490	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	32	first strand
Strand 2	C	425	430	parallel
Strand 3	C	471	476	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	41	first strand
Strand 2	C	393	396	anti-parallel
Strand 3	C	402	407	anti-parallel
Strand 4	C	412	418	anti-parallel
Strand 5	C	480	487	anti-parallel
Strand 6	C	446	451	anti-parallel
Strand 7	C	460	462	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	48	first strand
Strand 2	C	86	91	parallel
Strand 3	C	154	159	parallel
Strand 4	C	211	213	parallel
Strand 5	C	259	265	parallel
Strand 6	C	288	292	parallel
Strand 7	C	315	321	parallel
Strand 8	C	346	349	parallel
Strand 9	C	44	48	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	74	first strand
Strand 2	C	77	80	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	354	first strand
Strand 2	C	362	364	parallel
Strand 3	C	371	374	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	436	437	first strand
Strand 2	C	489	490	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	32	first strand
Strand 2	D	425	430	parallel
Strand 3	D	471	476	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	41	first strand
Strand 2	D	393	396	anti-parallel
Strand 3	D	402	407	anti-parallel
Strand 4	D	412	418	anti-parallel
Strand 5	D	480	486	anti-parallel
Strand 6	D	444	451	anti-parallel
Strand 7	D	460	466	anti-parallel

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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	48	first strand
Strand 2	D	86	91	parallel
Strand 3	D	154	159	parallel
Strand 4	D	211	213	parallel
Strand 5	D	259	265	parallel
Strand 6	D	288	292	parallel
Strand 7	D	315	321	parallel
Strand 8	D	346	349	parallel
Strand 9	D	44	48	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	74	first strand
Strand 2	D	77	80	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	353	354	first strand
Strand 2	D	362	364	parallel
Strand 3	D	371	374	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	436	437	first strand
Strand 2	D	489	490	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 24TG

Analysis of interatomic Contacts of Structural Units in PDB entry:
24TG