Analysis of interatomic Contacts of Structural Units in PDB entry:
24VC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24VC entry

There are 3 chains in PDB entry 24VC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 13LYS 604
B
 ARG 13LYS 604
C
 GLY 14LYS 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 24VC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 32Right-handed alpha
Helix 2
AA2
A
37 62Right-handed alpha
Helix 3
AA3
A
62 72Right-handed alpha
Helix 4
AA4
A
75 124Right-handed alpha
Helix 5
AA5
A
127 135Right-handed alpha
Helix 6
AA6
A
141 160Right-handed alpha
Helix 7
AA7
A
160 182Right-handed alpha
Helix 8
AA8
A
184 205Right-handed alpha
Helix 9
AA9
A
205 232Right-handed alpha
Helix 10
AB1
A
232 239Right-handed alpha
Helix 11
AB2
A
241 289Right-handed alpha
Helix 12
AB3
A
290 295Right-handed alpha
Helix 13
AB4
A
309 330Right-handed alpha
Helix 14
AB5
A
330 355Right-handed alpha
Helix 15
AB6
A
426 435Right-handed alpha
Helix 16
AB7
A
469 475Right-handed alpha
Helix 17
AB8
A
476 479Right-handed 310
Helix 18
AB9
A
486 500Right-handed alpha
Helix 19
AC1
A
502 510Right-handed alpha
Helix 20
AC2
A
525 541Right-handed alpha
Helix 21
AC3
A
555 569Right-handed alpha
Helix 22
AC4
A
579 585Right-handed 310
Helix 23
AC5
B
17 32Right-handed alpha
Helix 24
AC6
B
37 62Right-handed alpha
Helix 25
AC7
B
62 72Right-handed alpha
Helix 26
AC8
B
75 124Right-handed alpha
Helix 27
AC9
B
127 135Right-handed alpha
Helix 28
AD1
B
141 160Right-handed alpha
Helix 29
AD2
B
160 165Right-handed alpha
Helix 30
AD3
B
166 183Right-handed alpha
Helix 31
AD4
B
184 205Right-handed alpha
Helix 32
AD5
B
205 232Right-handed alpha
Helix 33
AD6
B
232 239Right-handed alpha
Helix 34
AD7
B
241 289Right-handed alpha
Helix 35
AD8
B
309 329Right-handed alpha
Helix 36
AD9
B
330 354Right-handed alpha
Helix 37
AE1
B
426 435Right-handed alpha
Helix 38
AE2
B
469 475Right-handed alpha
Helix 39
AE3
B
476 479Right-handed 310
Helix 40
AE4
B
487 500Right-handed alpha
Helix 41
AE5
B
503 510Right-handed alpha
Helix 42
AE6
B
525 541Right-handed alpha
Helix 43
AE7
B
555 569Right-handed alpha
Helix 44
AE8
B
579 585Right-handed 310
Helix 45
AE9
C
15 37Right-handed alpha
Helix 46
AF1
C
43 75Right-handed alpha
Helix 47
AF2
C
86 114Right-handed alpha
Helix 48
AF3
C
114 124Right-handed alpha
Helix 49
AF4
C
134 160Right-handed alpha
Helix 50
AF5
C
188 211Right-handed alpha
Helix 51
AF6
C
211 224Right-handed alpha
Helix 52
AF7
C
235 253Right-handed alpha
Helix 53
AF8
C
254 256Right-handed 310
Helix 54
AF9
C
262 291Right-handed alpha
Helix 55
AG1
C
292 297Right-handed 310
Helix 56
AG2
C
304 333Right-handed alpha
Helix 57
AG3
C
350 359Right-handed alpha
Helix 58
AG4
C
360 362Right-handed 310
Helix 59
AG5
C
365 389Right-handed alpha
Helix 60
AG6
C
406 432Right-handed alpha
Helix 61
AG7
C
432 438Right-handed alpha
Helix 62
AG8
C
478 486Right-handed alpha
Helix 63
AG9
C
487 514Right-handed alpha
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There are 7 sheets in PDB entry 24VC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 407first strand
Strand 2
A
387 394anti-parallel
Strand 3
A
410 411anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 407first strand
Strand 2
A
387 394anti-parallel
Strand 3
A
442 447anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
574 576parallel
Strand 3
A
544 548parallel
Strand 4
A
456 459parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
598 599anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
404 411first strand
Strand 2
B
387 394anti-parallel
Strand 3
B
442 447anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 459first strand
Strand 2
B
544 548parallel
Strand 3
B
573 576parallel
Strand 4
B
418 421parallel
Strand 5
B
591 592parallel
Strand 6
B
598 599anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
390 392first strand
Strand 2
C
395 398anti-parallel
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