Analysis of interatomic Contacts of Structural Units in PDB entry:
24VP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 24VP entry

There are 4 chains in PDB entry 24VP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 110LYS 366
B
ASN 70LYS 326
C
ASN 70LYS 326
D
ASN 70LYS 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 24VP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
112 117Right-handed alpha
Helix 2
AA2
A
124 143Right-handed alpha
Helix 3
AA3
A
149 178Right-handed alpha
Helix 4
AA4
A
188 195Right-handed alpha
Helix 5
AA5
A
196 208Right-handed alpha
Helix 6
AA6
A
229 239Right-handed alpha
Helix 7
AA7
A
244 257Right-handed alpha
Helix 8
AA8
A
257 283Right-handed alpha
Helix 9
AA9
A
302 315Right-handed alpha
Helix 10
AB1
A
326 345Right-handed alpha
Helix 11
AB2
A
345 366Right-handed alpha
Helix 12
AB3
B
71 85Right-handed alpha
Helix 13
AB4
B
91 114Right-handed alpha
Helix 14
AB5
B
117 147Right-handed alpha
Helix 15
AB6
B
156 164Right-handed alpha
Helix 16
AB7
B
165 182Right-handed alpha
Helix 17
AB8
B
200 209Right-handed alpha
Helix 18
AB9
B
215 227Right-handed alpha
Helix 19
AC1
B
227 253Right-handed alpha
Helix 20
AC2
B
262 275Right-handed alpha
Helix 21
AC3
B
286 305Right-handed alpha
Helix 22
AC4
B
305 326Right-handed alpha
Helix 23
AC5
C
71 85Right-handed alpha
Helix 24
AC6
C
91 112Right-handed alpha
Helix 25
AC7
C
113 118Right-handed 310
Helix 26
AC8
C
119 147Right-handed alpha
Helix 27
AC9
C
148 150Right-handed 310
Helix 28
AD1
C
155 163Right-handed alpha
Helix 29
AD2
C
165 183Right-handed alpha
Helix 30
AD3
C
201 209Right-handed alpha
Helix 31
AD4
C
210 212Right-handed 310
Helix 32
AD5
C
214 227Right-handed alpha
Helix 33
AD6
C
230 253Right-handed alpha
Helix 34
AD7
C
262 275Right-handed alpha
Helix 35
AD8
C
288 326Right-handed alpha
Helix 36
AD9
D
71 85Right-handed alpha
Helix 37
AE1
D
93 113Right-handed alpha
Helix 38
AE2
D
118 145Right-handed alpha
Helix 39
AE3
D
154 164Right-handed alpha
Helix 40
AE4
D
165 183Right-handed alpha
Helix 41
AE5
D
201 209Right-handed alpha
Helix 42
AE6
D
214 227Right-handed alpha
Helix 43
AE7
D
230 253Right-handed alpha
Helix 44
AE8
D
262 275Right-handed alpha
Helix 45
AE9
D
286 305Right-handed alpha
Helix 46
AF1
D
305 326Right-handed alpha
Back to top of page
There are no sheets in PDB entry 24VP

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il