Analysis of interatomic Contacts of Structural Units in PDB entry:
24XI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 24XI entry

There are 6 chains in PDB entry 24XI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	TYR 311
B	SER 2	TYR 311
C	GLU 3	TYR 311
D	GLU 3	TYR 311
E	LYS 4	TYR 311
F	SER 2	TYR 311

There are102 helices in PDB entry 24XI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	26	Right-handed alpha
Helix 2	AA2	A	38	47	Right-handed alpha
Helix 3	AA3	A	50	56	Right-handed alpha
Helix 4	AA4	A	62	67	Right-handed alpha
Helix 5	AA5	A	68	70	Right-handed 310
Helix 6	AA6	A	78	80	Right-handed 310
Helix 7	AA7	A	81	91	Right-handed alpha
Helix 8	AA8	A	102	104	Right-handed 310
Helix 9	AA9	A	105	120	Right-handed alpha
Helix 10	AB1	A	133	146	Right-handed alpha
Helix 11	AB2	A	160	169	Right-handed alpha
Helix 12	AB3	A	201	212	Right-handed alpha
Helix 13	AB4	A	227	235	Right-handed alpha
Helix 14	AB5	A	265	281	Right-handed alpha
Helix 15	AB6	A	289	293	Right-handed 310
Helix 16	AB7	A	294	299	Right-handed 310
Helix 17	AB8	A	302	311	Right-handed alpha
Helix 18	AB9	B	13	26	Right-handed alpha
Helix 19	AC1	B	38	47	Right-handed alpha
Helix 20	AC2	B	50	56	Right-handed alpha
Helix 21	AC3	B	62	67	Right-handed alpha
Helix 22	AC4	B	68	70	Right-handed 310
Helix 23	AC5	B	78	80	Right-handed 310
Helix 24	AC6	B	81	91	Right-handed alpha
Helix 25	AC7	B	102	104	Right-handed 310
Helix 26	AC8	B	105	120	Right-handed alpha
Helix 27	AC9	B	133	146	Right-handed alpha
Helix 28	AD1	B	160	169	Right-handed alpha
Helix 29	AD2	B	201	212	Right-handed alpha
Helix 30	AD3	B	227	234	Right-handed alpha
Helix 31	AD4	B	265	281	Right-handed alpha
Helix 32	AD5	B	289	293	Right-handed 310
Helix 33	AD6	B	294	299	Right-handed 310
Helix 34	AD7	B	302	311	Right-handed alpha
Helix 35	AD8	C	13	26	Right-handed alpha
Helix 36	AD9	C	38	47	Right-handed alpha
Helix 37	AE1	C	50	56	Right-handed alpha
Helix 38	AE2	C	62	67	Right-handed alpha
Helix 39	AE3	C	68	70	Right-handed 310
Helix 40	AE4	C	78	80	Right-handed 310
Helix 41	AE5	C	81	91	Right-handed alpha
Helix 42	AE6	C	102	104	Right-handed 310
Helix 43	AE7	C	105	120	Right-handed alpha
Helix 44	AE8	C	133	146	Right-handed alpha
Helix 45	AE9	C	160	169	Right-handed alpha
Helix 46	AF1	C	201	212	Right-handed alpha
Helix 47	AF2	C	227	234	Right-handed alpha
Helix 48	AF3	C	265	281	Right-handed alpha
Helix 49	AF4	C	289	293	Right-handed 310
Helix 50	AF5	C	294	299	Right-handed 310
Helix 51	AF6	C	302	311	Right-handed alpha
Helix 52	AF7	D	13	26	Right-handed alpha
Helix 53	AF8	D	38	47	Right-handed alpha
Helix 54	AF9	D	50	56	Right-handed alpha
Helix 55	AG1	D	62	67	Right-handed alpha
Helix 56	AG2	D	68	70	Right-handed 310
Helix 57	AG3	D	78	80	Right-handed 310
Helix 58	AG4	D	81	91	Right-handed alpha
Helix 59	AG5	D	102	104	Right-handed 310
Helix 60	AG6	D	105	120	Right-handed alpha
Helix 61	AG7	D	133	146	Right-handed alpha
Helix 62	AG8	D	160	169	Right-handed alpha
Helix 63	AG9	D	201	212	Right-handed alpha
Helix 64	AH1	D	227	234	Right-handed alpha
Helix 65	AH2	D	265	281	Right-handed alpha
Helix 66	AH3	D	289	293	Right-handed 310
Helix 67	AH4	D	294	299	Right-handed 310
Helix 68	AH5	D	302	311	Right-handed alpha
Helix 69	AH6	E	13	26	Right-handed alpha
Helix 70	AH7	E	38	47	Right-handed alpha
Helix 71	AH8	E	50	56	Right-handed alpha
Helix 72	AH9	E	62	67	Right-handed alpha
Helix 73	AI1	E	68	70	Right-handed 310
Helix 74	AI2	E	78	80	Right-handed 310
Helix 75	AI3	E	81	92	Right-handed alpha
Helix 76	AI4	E	102	104	Right-handed 310
Helix 77	AI5	E	105	120	Right-handed alpha
Helix 78	AI6	E	133	146	Right-handed alpha
Helix 79	AI7	E	160	169	Right-handed alpha
Helix 80	AI8	E	201	212	Right-handed alpha
Helix 81	AI9	E	227	234	Right-handed alpha
Helix 82	AJ1	E	265	281	Right-handed alpha
Helix 83	AJ2	E	289	293	Right-handed 310
Helix 84	AJ3	E	294	299	Right-handed 310
Helix 85	AJ4	E	302	311	Right-handed alpha
Helix 86	AJ5	F	13	26	Right-handed alpha
Helix 87	AJ6	F	38	47	Right-handed alpha
Helix 88	AJ7	F	50	56	Right-handed alpha
Helix 89	AJ8	F	62	67	Right-handed alpha
Helix 90	AJ9	F	68	70	Right-handed 310
Helix 91	AK1	F	78	80	Right-handed 310
Helix 92	AK2	F	81	92	Right-handed alpha
Helix 93	AK3	F	102	104	Right-handed 310
Helix 94	AK4	F	105	120	Right-handed alpha
Helix 95	AK5	F	133	146	Right-handed alpha
Helix 96	AK6	F	160	168	Right-handed alpha
Helix 97	AK7	F	202	212	Right-handed alpha
Helix 98	AK8	F	227	234	Right-handed alpha
Helix 99	AK9	F	265	281	Right-handed alpha
Helix 100	AL1	F	289	293	Right-handed 310
Helix 101	AL2	F	294	299	Right-handed 310
Helix 102	AL3	F	302	311	Right-handed alpha

There are 17 sheets in PDB entry 24XI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	59	first strand
Strand 2	A	29	36	parallel
Strand 3	A	5	10	parallel
Strand 4	A	72	75	parallel
Strand 5	A	95	97	parallel
Strand 6	A	123	125	parallel
Strand 7	A	286	288	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	155	first strand
Strand 2	A	238	249	anti-parallel
Strand 3	A	252	264	anti-parallel
Strand 4	B	252	264	anti-parallel
Strand 5	B	238	249	anti-parallel
Strand 6	B	148	155	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	159	first strand
Strand 2	A	173	184	anti-parallel
Strand 3	A	187	196	anti-parallel
Strand 4	A	219	224	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	59	first strand
Strand 2	B	29	36	parallel
Strand 3	B	5	10	parallel
Strand 4	B	72	75	parallel
Strand 5	B	95	97	parallel
Strand 6	B	123	125	parallel
Strand 7	B	286	288	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	159	first strand
Strand 2	B	173	184	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	219	224	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	59	first strand
Strand 2	C	29	36	parallel
Strand 3	C	5	10	parallel
Strand 4	C	72	75	parallel
Strand 5	C	95	97	parallel
Strand 6	C	123	125	parallel
Strand 7	C	286	288	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	155	first strand
Strand 2	C	238	249	anti-parallel
Strand 3	C	252	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	173	184	anti-parallel
Strand 3	C	187	196	anti-parallel
Strand 4	C	219	224	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	29	36	parallel
Strand 3	D	5	10	parallel
Strand 4	D	72	75	parallel
Strand 5	D	95	97	parallel
Strand 6	D	123	125	parallel
Strand 7	D	286	288	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	155	first strand
Strand 2	D	238	249	anti-parallel
Strand 3	D	252	264	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	173	184	anti-parallel
Strand 3	D	187	196	anti-parallel
Strand 4	D	219	224	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	59	first strand
Strand 2	E	29	36	parallel
Strand 3	E	5	10	parallel
Strand 4	E	72	75	parallel
Strand 5	E	95	97	parallel
Strand 6	E	123	125	parallel
Strand 7	E	286	288	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	155	first strand
Strand 2	E	238	249	anti-parallel
Strand 3	E	252	264	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	173	184	anti-parallel
Strand 3	E	187	196	anti-parallel
Strand 4	E	219	224	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	59	first strand
Strand 2	F	29	36	parallel
Strand 3	F	5	10	parallel
Strand 4	F	72	75	parallel
Strand 5	F	95	97	parallel
Strand 6	F	123	125	parallel
Strand 7	F	286	288	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	155	first strand
Strand 2	F	238	249	anti-parallel
Strand 3	F	252	264	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	173	184	anti-parallel
Strand 3	F	187	196	anti-parallel
Strand 4	F	219	224	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 24XI

Analysis of interatomic Contacts of Structural Units in PDB entry:
24XI