Analysis of interatomic Contacts of Structural Units in PDB entry:
26QT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 26QT entry

There is 1 chain in PDB entry 26QT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 26QT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 34Right-handed alpha
Helix 2
AA2
A
65 75Right-handed alpha
Helix 3
AA3
A
92 105Right-handed alpha
Helix 4
AA4
A
123 128Right-handed alpha
Helix 5
AA5
A
128 135Right-handed alpha
Helix 6
AA6
A
152 160Right-handed alpha
Helix 7
AA7
A
179 204Right-handed alpha
Helix 8
AA8
A
217 224Right-handed alpha
Helix 9
AA9
A
225 230Right-handed 310
Helix 10
AB1
A
234 247Right-handed alpha
Helix 11
AB2
A
265 284Right-handed alpha
Helix 12
AB3
A
286 291Right-handed alpha
Helix 13
AB4
A
292 295Right-handed 310
Helix 14
AB5
A
298 311Right-handed alpha
Helix 15
AB6
A
314 339Right-handed alpha
Helix 16
AB7
A
345 368Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 26QT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
81 87parallel
Strand 3
A
53 59parallel
Strand 4
A
139 143parallel
Strand 5
A
212 216anti-parallel
Strand 6
A
165 174anti-parallel
Strand 7
A
249 259parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
A
379 381anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il