Analysis of interatomic Contacts of Structural Units in PDB entry:
27KE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 27KE entry

There are 2 chains in PDB entry 27KE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 597
B
 THR 1PRO 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 27KE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 35Right-handed alpha
Helix 2
AA2
A
37 64Right-handed alpha
Helix 3
AA3
A
72 84Right-handed alpha
Helix 4
AA4
A
85 90Right-handed 310
Helix 5
AA5
A
91 112Right-handed alpha
Helix 6
AA6
A
129 137Right-handed alpha
Helix 7
AA7
A
139 176Right-handed alpha
Helix 8
AA8
A
180 187Right-handed alpha
Helix 9
AA9
A
200 234Right-handed alpha
Helix 10
AB1
A
248 250Right-handed 310
Helix 11
AB2
A
258 260Right-handed 310
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
276 283Right-handed alpha
Helix 14
AB5
A
286 301Right-handed alpha
Helix 15
AB6
A
307 314Right-handed alpha
Helix 16
AB7
A
348 369Right-handed alpha
Helix 17
AB8
A
370 371Right-handed 310
Helix 18
AB9
A
372 376Right-handed 310
Helix 19
AC1
A
383 396Right-handed alpha
Helix 20
AC2
A
397 404Right-handed alpha
Helix 21
AC3
A
414 430Right-handed alpha
Helix 22
AC4
A
432 448Right-handed alpha
Helix 23
AC5
A
452 454Right-handed 310
Helix 24
AC6
A
455 467Right-handed alpha
Helix 25
AC7
A
481 485Right-handed 310
Helix 26
AC8
A
486 492Right-handed alpha
Helix 27
AC9
A
495 516Right-handed alpha
Helix 28
AD1
A
521 525Right-handed 310
Helix 29
AD2
A
530 544Right-handed alpha
Helix 30
AD3
A
548 557Right-handed alpha
Helix 31
AD4
A
564 571Right-handed alpha
Helix 32
AD5
A
571 582Right-handed alpha
Helix 33
AD6
B
5 11Right-handed alpha
Helix 34
AD7
B
17 21Right-handed 310
Helix 35
AD8
B
33 38Right-handed alpha
Helix 36
AD9
B
51 56Right-handed alpha
Helix 37
AE1
B
74 78Right-handed 310
Helix 38
AE2
B
84 90Right-handed alpha
Helix 39
AE3
B
106 111Right-handed alpha
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There are 6 sheets in PDB entry 27KE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
123 125anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
470 471parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 335first strand
Strand 2
A
338 342anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 26first strand
Strand 2
B
62 71anti-parallel
Strand 3
B
175 184anti-parallel
Strand 4
B
99 105anti-parallel
Strand 5
B
44 48anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
160 162anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 142first strand
Strand 2
B
156 157anti-parallel
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