Analysis of interatomic Contacts of Structural Units in PDB entry:
27KF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 27KF entry

There are 2 chains in PDB entry 27KF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 597
B
 THR 1PRO 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 27KF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 34Right-handed alpha
Helix 2
AA2
A
37 64Right-handed alpha
Helix 3
AA3
A
72 83Right-handed alpha
Helix 4
AA4
A
85 90Right-handed 310
Helix 5
AA5
A
91 111Right-handed alpha
Helix 6
AA6
A
119 123Right-handed 310
Helix 7
AA7
A
129 137Right-handed alpha
Helix 8
AA8
A
139 176Right-handed alpha
Helix 9
AA9
A
180 187Right-handed alpha
Helix 10
AB1
A
200 235Right-handed alpha
Helix 11
AB2
A
248 250Right-handed 310
Helix 12
AB3
A
257 260Right-handed 310
Helix 13
AB4
A
261 266Right-handed alpha
Helix 14
AB5
A
276 283Right-handed alpha
Helix 15
AB6
A
286 302Right-handed alpha
Helix 16
AB7
A
307 314Right-handed alpha
Helix 17
AB8
A
348 369Right-handed alpha
Helix 18
AB9
A
370 371Right-handed 310
Helix 19
AC1
A
372 376Right-handed 310
Helix 20
AC2
A
382 395Right-handed alpha
Helix 21
AC3
A
397 404Right-handed alpha
Helix 22
AC4
A
414 429Right-handed alpha
Helix 23
AC5
A
432 448Right-handed alpha
Helix 24
AC6
A
452 454Right-handed 310
Helix 25
AC7
A
455 468Right-handed alpha
Helix 26
AC8
A
481 485Right-handed 310
Helix 27
AC9
A
486 491Right-handed alpha
Helix 28
AD1
A
495 517Right-handed alpha
Helix 29
AD2
A
521 525Right-handed 310
Helix 30
AD3
A
530 544Right-handed alpha
Helix 31
AD4
A
548 557Right-handed alpha
Helix 32
AD5
A
564 571Right-handed alpha
Helix 33
AD6
A
571 582Right-handed alpha
Helix 34
AD7
B
5 11Right-handed alpha
Helix 35
AD8
B
33 39Right-handed alpha
Helix 36
AD9
B
52 56Right-handed 310
Helix 37
AE1
B
84 90Right-handed alpha
Helix 38
AE2
B
106 111Right-handed alpha
Helix 39
AE3
B
170 174Right-handed 310
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There are 4 sheets in PDB entry 27KF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
470 471parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
339 342anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 26first strand
Strand 2
B
63 70anti-parallel
Strand 3
B
176 183anti-parallel
Strand 4
B
99 105anti-parallel
Strand 5
B
44 48anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
160 162anti-parallel
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