Analysis of interatomic Contacts of Structural Units in PDB entry:
28WZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 28WZ entry

There are 3 chains in PDB entry 28WZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 575PHE 800
B
 ASN 7VAL 398
C
 ASP 17LYS 66
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 28WZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
575 592Right-handed alpha
Helix 2
AA2
A
595 613Right-handed alpha
Helix 3
AA3
A
618 633Right-handed alpha
Helix 4
AA4
A
636 654Right-handed alpha
Helix 5
AA5
A
658 674Right-handed alpha
Helix 6
AA6
A
675 686Right-handed alpha
Helix 7
AA7
A
687 693Right-handed alpha
Helix 8
AA8
A
694 709Right-handed alpha
Helix 9
AA9
A
710 721Right-handed alpha
Helix 10
AB1
A
724 748Right-handed alpha
Helix 11
AB2
A
754 762Right-handed alpha
Helix 12
AB3
A
765 777Right-handed alpha
Helix 13
AB4
A
789 797Right-handed alpha
Helix 14
AB5
B
8 20Right-handed alpha
Helix 15
AB6
B
22 31Right-handed alpha
Helix 16
AB7
B
57 75Right-handed alpha
Helix 17
AB8
B
76 98Right-handed alpha
Helix 18
AB9
B
104 130Right-handed alpha
Helix 19
AC1
B
135 155Right-handed alpha
Helix 20
AC2
B
156 158Right-handed 310
Helix 21
AC3
B
163 183Right-handed alpha
Helix 22
AC4
B
184 186Right-handed 310
Helix 23
AC5
B
187 198Right-handed alpha
Helix 24
AC6
B
205 224Right-handed alpha
Helix 25
AC7
B
225 240Right-handed alpha
Helix 26
AC8
B
244 263Right-handed alpha
Helix 27
AC9
B
267 275Right-handed alpha
Helix 28
AD1
B
276 289Right-handed alpha
Helix 29
AD2
B
290 306Right-handed alpha
Helix 30
AD3
B
310 334Right-handed alpha
Helix 31
AD4
B
340 351Right-handed alpha
Helix 32
AD5
B
356 371Right-handed alpha
Helix 33
AD6
B
394 398Right-handed 310
Helix 34
AD7
C
50 62Right-handed alpha
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There are 3 sheets in PDB entry 28WZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 753first strand
Strand 2
A
787 788anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 266first strand
Strand 2
C
39 40anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 339first strand
Strand 2
B
383 385anti-parallel
Strand 3
B
376 378anti-parallel
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