Analysis of interatomic Contacts of Structural Units in PDB entry:
29ON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 29ON entry

There are 4 chains in PDB entry 29ON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 12SER 507
B
 THR 13SER 507
C
 GLN 3SER 122
D
 MET 1SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 29ON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 49Right-handed alpha
Helix 2
AA2
A
52 70Right-handed alpha
Helix 3
AA3
A
70 82Right-handed alpha
Helix 4
AA4
A
82 100Right-handed alpha
Helix 5
AA5
A
101 104Right-handed 310
Helix 6
AA6
A
106 136Right-handed alpha
Helix 7
AA7
A
138 153Right-handed alpha
Helix 8
AA8
A
159 171Right-handed alpha
Helix 9
AA9
A
174 179Right-handed alpha
Helix 10
AB1
A
179 192Right-handed alpha
Helix 11
AB2
A
209 233Right-handed alpha
Helix 12
AB3
A
238 260Right-handed alpha
Helix 13
AB4
A
267 272Right-handed 310
Helix 14
AB5
A
273 303Right-handed alpha
Helix 15
AB6
A
310 315Right-handed alpha
Helix 16
AB7
A
317 327Right-handed alpha
Helix 17
AB8
A
329 337Right-handed alpha
Helix 18
AB9
A
338 360Right-handed alpha
Helix 19
AC1
A
365 381Right-handed alpha
Helix 20
AC2
A
382 394Right-handed alpha
Helix 21
AC3
A
396 400Right-handed 310
Helix 22
AC4
A
401 433Right-handed alpha
Helix 23
AC5
A
445 454Right-handed alpha
Helix 24
AC6
A
454 466Right-handed alpha
Helix 25
AC7
A
467 504Right-handed alpha
Helix 26
AC8
B
15 50Right-handed alpha
Helix 27
AC9
B
52 70Right-handed alpha
Helix 28
AD1
B
70 82Right-handed alpha
Helix 29
AD2
B
82 100Right-handed alpha
Helix 30
AD3
B
101 104Right-handed 310
Helix 31
AD4
B
106 136Right-handed alpha
Helix 32
AD5
B
138 153Right-handed alpha
Helix 33
AD6
B
155 171Right-handed alpha
Helix 34
AD7
B
174 179Right-handed alpha
Helix 35
AD8
B
179 194Right-handed alpha
Helix 36
AD9
B
209 233Right-handed alpha
Helix 37
AE1
B
238 260Right-handed alpha
Helix 38
AE2
B
267 272Right-handed 310
Helix 39
AE3
B
273 302Right-handed alpha
Helix 40
AE4
B
308 315Right-handed alpha
Helix 41
AE5
B
316 326Right-handed alpha
Helix 42
AE6
B
329 337Right-handed alpha
Helix 43
AE7
B
338 360Right-handed alpha
Helix 44
AE8
B
365 381Right-handed alpha
Helix 45
AE9
B
382 394Right-handed alpha
Helix 46
AF1
B
396 398Right-handed 310
Helix 47
AF2
B
399 433Right-handed alpha
Helix 48
AF3
B
445 454Right-handed alpha
Helix 49
AF4
B
454 466Right-handed alpha
Helix 50
AF5
B
467 504Right-handed alpha
Helix 51
AF6
C
64 67Right-handed 310
Helix 52
AF7
C
89 93Right-handed 310
Helix 53
AF8
D
64 67Right-handed 310
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There are 7 sheets in PDB entry 29ON. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 5first strand
Strand 2
C
27 28anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
20 25anti-parallel
Strand 3
C
80 85anti-parallel
Strand 4
C
70 75anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 15first strand
Strand 2
C
116 121parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
36 41anti-parallel
Strand 5
C
48 53anti-parallel
Strand 6
C
61 62anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 15first strand
Strand 2
D
120 121parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 25first strand
Strand 2
D
80 85anti-parallel
Strand 3
D
70 75anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 62first strand
Strand 2
D
47 52anti-parallel
Strand 3
D
37 41anti-parallel
Strand 4
D
94 100anti-parallel
Strand 5
D
111 112anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 62first strand
Strand 2
D
47 52anti-parallel
Strand 3
D
37 41anti-parallel
Strand 4
D
94 100anti-parallel
Strand 5
D
116 118anti-parallel
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