Analysis of interatomic Contacts of Structural Units in PDB entry:
29TE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 29TE entry

There are 2 chains in PDB entry 29TE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 63	GLY 1092
B	GLU 18	ASP 517

There are 45 helices in PDB entry 29TE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	88	Right-handed alpha
Helix 2	AA2	A	111	116	Right-handed alpha
Helix 3	AA3	A	122	136	Right-handed alpha
Helix 4	AA4	A	144	165	Right-handed alpha
Helix 5	AA5	A	189	208	Right-handed alpha
Helix 6	AA6	A	241	253	Right-handed alpha
Helix 7	AA7	A	254	259	Right-handed 310
Helix 8	AA8	A	310	322	Right-handed alpha
Helix 9	AA9	A	324	340	Right-handed alpha
Helix 10	AB1	A	369	384	Right-handed alpha
Helix 11	AB2	A	405	410	Right-handed 310
Helix 12	AB3	A	414	419	Right-handed alpha
Helix 13	AB4	A	419	437	Right-handed alpha
Helix 14	AB5	A	463	466	Right-handed 310
Helix 15	AB6	A	467	477	Right-handed alpha
Helix 16	AB7	A	478	497	Right-handed alpha
Helix 17	AB8	A	521	535	Right-handed alpha
Helix 18	AB9	A	536	554	Right-handed alpha
Helix 19	AC1	A	578	591	Right-handed alpha
Helix 20	AC2	A	595	601	Right-handed alpha
Helix 21	AC3	A	664	667	Right-handed 310
Helix 22	AC4	A	668	674	Right-handed alpha
Helix 23	AC5	A	675	682	Right-handed alpha
Helix 24	AC6	A	748	755	Right-handed 310
Helix 25	AC7	A	928	933	Right-handed alpha
Helix 26	AC8	A	947	951	Right-handed 310
Helix 27	AC9	A	986	994	Right-handed alpha
Helix 28	AD1	A	1050	1060	Right-handed alpha
Helix 29	AD2	A	1078	1082	Right-handed 310
Helix 30	AD3	B	27	38	Right-handed alpha
Helix 31	AD4	B	50	68	Right-handed alpha
Helix 32	AD5	B	82	89	Right-handed alpha
Helix 33	AD6	B	114	127	Right-handed alpha
Helix 34	AD7	B	134	143	Right-handed alpha
Helix 35	AD8	B	157	171	Right-handed alpha
Helix 36	AD9	B	182	190	Right-handed alpha
Helix 37	AE1	B	214	226	Right-handed alpha
Helix 38	AE2	B	236	245	Right-handed alpha
Helix 39	AE3	B	255	272	Right-handed alpha
Helix 40	AE4	B	288	294	Right-handed alpha
Helix 41	AE5	B	324	338	Right-handed alpha
Helix 42	AE6	B	361	369	Right-handed alpha
Helix 43	AE7	B	385	405	Right-handed alpha
Helix 44	AE8	B	406	409	Right-handed 310
Helix 45	AE9	B	452	464	Right-handed alpha

There are 14 sheets in PDB entry 29TE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	95	first strand
Strand 2	A	100	102	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	188	first strand
Strand 2	A	268	270	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	232	first strand
Strand 2	A	238	239	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	303	first strand
Strand 2	A	350	352	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	363	first strand
Strand 2	A	449	451	anti-parallel
Strand 3	A	457	459	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	440	first strand
Strand 2	A	446	447	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	461	462	first strand
Strand 2	A	503	504	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	562	565	first strand
Strand 2	A	570	572	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	745	746	first strand
Strand 2	A	768	769	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	956	958	first strand
Strand 2	A	977	981	parallel
Strand 3	A	1006	1010	parallel
Strand 4	A	1045	1047	parallel
Strand 5	A	914	917	anti-parallel
Strand 6	A	823	829	anti-parallel
Strand 7	A	1062	1068	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	73	78	parallel
Strand 3	B	41	46	parallel
Strand 4	B	96	100	anti-parallel
Strand 5	B	106	108	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	177	179	parallel
Strand 3	B	147	152	parallel
Strand 4	B	195	200	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	283	first strand
Strand 2	B	248	253	parallel
Strand 3	B	303	308	anti-parallel
Strand 4	B	313	316	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	360	first strand
Strand 2	B	411	417	parallel
Strand 3	B	375	381	parallel
Strand 4	B	434	436	anti-parallel
Strand 5	B	445	446	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 29TE

Analysis of interatomic Contacts of Structural Units in PDB entry:
29TE