Analysis of interatomic Contacts of Structural Units in PDB entry:
29UN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 29UN entry

There are 2 chains in PDB entry 29UN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	MET 4	GLU 480
F	SER 2	ASP 160

There are212 helices in PDB entry 29UN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	5	18	Right-handed alpha
Helix 2	AA2	E	21	30	Right-handed alpha
Helix 3	AA3	E	41	45	Right-handed 310
Helix 4	AA4	E	62	68	Right-handed alpha
Helix 5	AA5	E	86	92	Right-handed alpha
Helix 6	AA6	E	119	126	Right-handed alpha
Helix 7	AA7	E	127	142	Right-handed alpha
Helix 8	AA8	E	154	160	Right-handed alpha
Helix 9	AA9	E	162	175	Right-handed alpha
Helix 10	AB1	E	190	206	Right-handed alpha
Helix 11	AB2	E	230	232	Right-handed 310
Helix 12	AB3	E	233	245	Right-handed alpha
Helix 13	AB4	E	258	265	Right-handed alpha
Helix 14	AB5	E	266	268	Right-handed 310
Helix 15	AB6	E	275	291	Right-handed alpha
Helix 16	AB7	E	300	314	Right-handed alpha
Helix 17	AB8	E	317	347	Right-handed alpha
Helix 18	AB9	E	358	363	Right-handed alpha
Helix 19	AC1	E	363	370	Right-handed alpha
Helix 20	AC2	E	383	394	Right-handed alpha
Helix 21	AC3	E	405	417	Right-handed alpha
Helix 22	AC4	E	424	434	Right-handed alpha
Helix 23	AC5	E	443	447	Right-handed 310
Helix 24	AC6	E	451	468	Right-handed alpha
Helix 25	AC7	E	469	474	Right-handed 310
Helix 26	AC8	F	10	15	Right-handed alpha
Helix 27	AC9	F	17	32	Right-handed alpha
Helix 28	AD1	F	36	47	Right-handed alpha
Helix 29	AD2	F	49	58	Right-handed alpha
Helix 30	AD3	F	70	81	Right-handed alpha
Helix 31	AD4	F	92	108	Right-handed alpha
Helix 32	AD5	F	119	126	Right-handed alpha
Helix 33	AD6	F	127	143	Right-handed alpha
Helix 34	AD7	F	152	159	Right-handed alpha
Helix 35	AD8	F	161	172	Right-handed alpha
Helix 36	AD9	F	192	210	Right-handed alpha
Helix 37	AE1	F	212	216	Right-handed 310
Helix 38	AE2	F	233	248	Right-handed alpha
Helix 39	AE3	F	277	284	Right-handed alpha
Helix 40	AE4	F	285	287	Right-handed 310
Helix 41	AE5	F	294	297	Right-handed 310
Helix 42	AE6	F	298	308	Right-handed alpha
Helix 43	AE7	F	320	337	Right-handed alpha
Helix 44	AE8	F	341	363	Right-handed alpha
Helix 45	AE9	F	372	386	Right-handed alpha
Helix 46	AF1	F	399	412	Right-handed alpha
Helix 47	AF2	F	413	417	Right-handed 310
Helix 48	AF3	F	426	437	Right-handed alpha
Helix 49	AF4	F	447	459	Right-handed alpha
Helix 50	AF5	F	460	463	Right-handed 310
Helix 51	AF6	F	478	482	Right-handed 310
Helix 52	AF7	F	485	509	Right-handed alpha
Helix 53	AF8	F	515	519	Right-handed 310
Helix 54	AF9	A	5	18	Right-handed alpha
Helix 55	AG1	A	21	30	Right-handed alpha
Helix 56	AG2	A	41	45	Right-handed 310
Helix 57	AG3	A	62	68	Right-handed alpha
Helix 58	AG4	A	86	92	Right-handed alpha
Helix 59	AG5	A	119	126	Right-handed alpha
Helix 60	AG6	A	127	142	Right-handed alpha
Helix 61	AG7	A	154	160	Right-handed alpha
Helix 62	AG8	A	162	175	Right-handed alpha
Helix 63	AG9	A	190	206	Right-handed alpha
Helix 64	AH1	A	230	232	Right-handed 310
Helix 65	AH2	A	233	245	Right-handed alpha
Helix 66	AH3	A	258	265	Right-handed alpha
Helix 67	AH4	A	266	268	Right-handed 310
Helix 68	AH5	A	275	291	Right-handed alpha
Helix 69	AH6	A	300	314	Right-handed alpha
Helix 70	AH7	A	317	347	Right-handed alpha
Helix 71	AH8	A	358	363	Right-handed alpha
Helix 72	AH9	A	363	369	Right-handed alpha
Helix 73	AI1	A	383	394	Right-handed alpha
Helix 74	AI2	A	405	417	Right-handed alpha
Helix 75	AI3	A	424	434	Right-handed alpha
Helix 76	AI4	A	443	447	Right-handed 310
Helix 77	AI5	A	451	468	Right-handed alpha
Helix 78	AI6	A	469	474	Right-handed 310
Helix 79	AI7	B	10	15	Right-handed alpha
Helix 80	AI8	B	17	32	Right-handed alpha
Helix 81	AI9	B	36	48	Right-handed alpha
Helix 82	AJ1	B	49	58	Right-handed alpha
Helix 83	AJ2	B	70	81	Right-handed alpha
Helix 84	AJ3	B	92	108	Right-handed alpha
Helix 85	AJ4	B	119	126	Right-handed alpha
Helix 86	AJ5	B	127	143	Right-handed alpha
Helix 87	AJ6	B	152	159	Right-handed alpha
Helix 88	AJ7	B	161	172	Right-handed alpha
Helix 89	AJ8	B	192	210	Right-handed alpha
Helix 90	AJ9	B	212	216	Right-handed 310
Helix 91	AK1	B	233	248	Right-handed alpha
Helix 92	AK2	B	277	284	Right-handed alpha
Helix 93	AK3	B	285	287	Right-handed 310
Helix 94	AK4	B	294	297	Right-handed 310
Helix 95	AK5	B	298	308	Right-handed alpha
Helix 96	AK6	B	320	337	Right-handed alpha
Helix 97	AK7	B	341	363	Right-handed alpha
Helix 98	AK8	B	372	386	Right-handed alpha
Helix 99	AK9	B	399	412	Right-handed alpha
Helix 100	AL1	B	413	417	Right-handed 310
Helix 101	AL2	B	426	437	Right-handed alpha
Helix 102	AL3	B	447	459	Right-handed alpha
Helix 103	AL4	B	460	463	Right-handed 310
Helix 104	AL5	B	478	482	Right-handed 310
Helix 105	AL6	B	485	509	Right-handed alpha
Helix 106	AL7	B	515	519	Right-handed 310
Helix 107	AL8	C	5	18	Right-handed alpha
Helix 108	AL9	C	21	30	Right-handed alpha
Helix 109	AM1	C	41	45	Right-handed 310
Helix 110	AM2	C	62	68	Right-handed alpha
Helix 111	AM3	C	86	92	Right-handed alpha
Helix 112	AM4	C	119	126	Right-handed alpha
Helix 113	AM5	C	127	142	Right-handed alpha
Helix 114	AM6	C	154	160	Right-handed alpha
Helix 115	AM7	C	162	175	Right-handed alpha
Helix 116	AM8	C	190	206	Right-handed alpha
Helix 117	AM9	C	230	232	Right-handed 310
Helix 118	AN1	C	233	245	Right-handed alpha
Helix 119	AN2	C	258	264	Right-handed alpha
Helix 120	AN3	C	265	268	Right-handed 310
Helix 121	AN4	C	275	291	Right-handed alpha
Helix 122	AN5	C	300	314	Right-handed alpha
Helix 123	AN6	C	317	347	Right-handed alpha
Helix 124	AN7	C	358	363	Right-handed alpha
Helix 125	AN8	C	363	370	Right-handed alpha
Helix 126	AN9	C	383	394	Right-handed alpha
Helix 127	AO1	C	405	417	Right-handed alpha
Helix 128	AO2	C	424	434	Right-handed alpha
Helix 129	AO3	C	443	447	Right-handed 310
Helix 130	AO4	C	451	468	Right-handed alpha
Helix 131	AO5	C	469	474	Right-handed 310
Helix 132	AO6	D	10	15	Right-handed alpha
Helix 133	AO7	D	17	32	Right-handed alpha
Helix 134	AO8	D	36	47	Right-handed alpha
Helix 135	AO9	D	49	58	Right-handed alpha
Helix 136	AP1	D	70	81	Right-handed alpha
Helix 137	AP2	D	92	108	Right-handed alpha
Helix 138	AP3	D	119	126	Right-handed alpha
Helix 139	AP4	D	127	143	Right-handed alpha
Helix 140	AP5	D	152	159	Right-handed alpha
Helix 141	AP6	D	161	172	Right-handed alpha
Helix 142	AP7	D	192	210	Right-handed alpha
Helix 143	AP8	D	212	216	Right-handed 310
Helix 144	AP9	D	233	248	Right-handed alpha
Helix 145	AQ1	D	277	284	Right-handed alpha
Helix 146	AQ2	D	285	287	Right-handed 310
Helix 147	AQ3	D	294	297	Right-handed 310
Helix 148	AQ4	D	298	308	Right-handed alpha
Helix 149	AQ5	D	320	337	Right-handed alpha
Helix 150	AQ6	D	341	363	Right-handed alpha
Helix 151	AQ7	D	372	386	Right-handed alpha
Helix 152	AQ8	D	399	412	Right-handed alpha
Helix 153	AQ9	D	413	417	Right-handed 310
Helix 154	AR1	D	426	437	Right-handed alpha
Helix 155	AR2	D	447	459	Right-handed alpha
Helix 156	AR3	D	460	463	Right-handed 310
Helix 157	AR4	D	478	482	Right-handed 310
Helix 158	AR5	D	485	509	Right-handed alpha
Helix 159	AR6	D	515	519	Right-handed 310
Helix 160	AR7	G	5	18	Right-handed alpha
Helix 161	AR8	G	21	30	Right-handed alpha
Helix 162	AR9	G	41	45	Right-handed 310
Helix 163	AS1	G	62	68	Right-handed alpha
Helix 164	AS2	G	86	92	Right-handed alpha
Helix 165	AS3	G	119	126	Right-handed alpha
Helix 166	AS4	G	127	142	Right-handed alpha
Helix 167	AS5	G	154	160	Right-handed alpha
Helix 168	AS6	G	162	175	Right-handed alpha
Helix 169	AS7	G	190	206	Right-handed alpha
Helix 170	AS8	G	230	232	Right-handed 310
Helix 171	AS9	G	233	245	Right-handed alpha
Helix 172	AT1	G	258	265	Right-handed alpha
Helix 173	AT2	G	266	268	Right-handed 310
Helix 174	AT3	G	275	291	Right-handed alpha
Helix 175	AT4	G	300	314	Right-handed alpha
Helix 176	AT5	G	317	347	Right-handed alpha
Helix 177	AT6	G	358	363	Right-handed alpha
Helix 178	AT7	G	363	369	Right-handed alpha
Helix 179	AT8	G	383	394	Right-handed alpha
Helix 180	AT9	G	405	417	Right-handed alpha
Helix 181	AU1	G	424	434	Right-handed alpha
Helix 182	AU2	G	443	447	Right-handed 310
Helix 183	AU3	G	451	468	Right-handed alpha
Helix 184	AU4	G	469	474	Right-handed 310
Helix 185	AU5	H	10	15	Right-handed alpha
Helix 186	AU6	H	17	32	Right-handed alpha
Helix 187	AU7	H	36	48	Right-handed alpha
Helix 188	AU8	H	49	58	Right-handed alpha
Helix 189	AU9	H	70	81	Right-handed alpha
Helix 190	AV1	H	92	108	Right-handed alpha
Helix 191	AV2	H	119	126	Right-handed alpha
Helix 192	AV3	H	127	143	Right-handed alpha
Helix 193	AV4	H	152	159	Right-handed alpha
Helix 194	AV5	H	161	172	Right-handed alpha
Helix 195	AV6	H	192	210	Right-handed alpha
Helix 196	AV7	H	212	216	Right-handed 310
Helix 197	AV8	H	233	248	Right-handed alpha
Helix 198	AV9	H	277	284	Right-handed alpha
Helix 199	AW1	H	285	287	Right-handed 310
Helix 200	AW2	H	294	297	Right-handed 310
Helix 201	AW3	H	298	308	Right-handed alpha
Helix 202	AW4	H	320	337	Right-handed alpha
Helix 203	AW5	H	341	363	Right-handed alpha
Helix 204	AW6	H	372	386	Right-handed alpha
Helix 205	AW7	H	399	412	Right-handed alpha
Helix 206	AW8	H	413	417	Right-handed 310
Helix 207	AW9	H	426	437	Right-handed alpha
Helix 208	AX1	H	447	459	Right-handed alpha
Helix 209	AX2	H	460	463	Right-handed 310
Helix 210	AX3	H	478	482	Right-handed 310
Helix 211	AX4	H	485	509	Right-handed alpha
Helix 212	AX5	H	515	519	Right-handed 310

There are 24 sheets in PDB entry 29UN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	34	first strand
Strand 2	E	399	402	anti-parallel
Strand 3	E	373	379	parallel
Strand 4	E	350	353	parallel
Strand 5	E	420	423	parallel
Strand 6	E	438	440	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	178	181	first strand
Strand 2	E	148	152	parallel
Strand 3	E	79	83	parallel
Strand 4	E	114	115	parallel
Strand 5	F	63	64	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	248	254	first strand
Strand 2	E	222	228	parallel
Strand 3	E	270	273	parallel
Strand 4	E	294	296	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	114	115	first strand
Strand 2	F	85	90	parallel
Strand 3	F	146	151	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	251	253	first strand
Strand 2	F	224	227	parallel
Strand 3	F	289	292	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	420	423	first strand
Strand 2	F	389	395	parallel
Strand 3	F	366	370	parallel
Strand 4	F	441	444	parallel
Strand 5	F	466	468	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	399	402	anti-parallel
Strand 3	A	373	379	parallel
Strand 4	A	350	353	parallel
Strand 5	A	420	423	parallel
Strand 6	A	438	440	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	148	152	parallel
Strand 3	A	79	83	parallel
Strand 4	A	114	115	parallel
Strand 5	B	63	64	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	254	first strand
Strand 2	A	222	228	parallel
Strand 3	A	270	273	parallel
Strand 4	A	294	296	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	115	first strand
Strand 2	B	85	90	parallel
Strand 3	B	146	151	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	251	253	first strand
Strand 2	B	224	227	parallel
Strand 3	B	289	292	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	420	423	first strand
Strand 2	B	389	395	parallel
Strand 3	B	366	370	parallel
Strand 4	B	441	444	parallel
Strand 5	B	466	468	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	399	402	anti-parallel
Strand 3	C	373	379	parallel
Strand 4	C	350	353	parallel
Strand 5	C	420	423	parallel
Strand 6	C	438	440	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	181	first strand
Strand 2	C	148	152	parallel
Strand 3	C	79	83	parallel
Strand 4	C	114	115	parallel
Strand 5	D	63	64	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	254	first strand
Strand 2	C	222	228	parallel
Strand 3	C	270	273	parallel
Strand 4	C	294	296	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	115	first strand
Strand 2	D	85	90	parallel
Strand 3	D	146	151	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	251	253	first strand
Strand 2	D	224	227	parallel
Strand 3	D	289	292	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	420	423	first strand
Strand 2	D	389	395	parallel
Strand 3	D	366	370	parallel
Strand 4	D	441	444	parallel
Strand 5	D	466	468	parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	32	34	first strand
Strand 2	G	399	402	anti-parallel
Strand 3	G	373	379	parallel
Strand 4	G	350	353	parallel
Strand 5	G	420	423	parallel
Strand 6	G	438	440	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	178	181	first strand
Strand 2	G	148	152	parallel
Strand 3	G	79	83	parallel
Strand 4	G	114	115	parallel
Strand 5	H	63	64	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	248	254	first strand
Strand 2	G	222	228	parallel
Strand 3	G	270	273	parallel
Strand 4	G	294	296	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	115	first strand
Strand 2	H	85	90	parallel
Strand 3	H	146	151	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	251	253	first strand
Strand 2	H	224	227	parallel
Strand 3	H	289	292	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	420	423	first strand
Strand 2	H	389	395	parallel
Strand 3	H	366	370	parallel
Strand 4	H	441	444	parallel
Strand 5	H	466	468	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 29UN

Analysis of interatomic Contacts of Structural Units in PDB entry:
29UN