Analysis of interatomic Contacts of Structural Units in PDB entry:
29ZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 29ZE entry

There is 1 chain in PDB entry 29ZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28VAL 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 29ZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 41Right-handed alpha
Helix 2
AA2
A
42 46Right-handed 310
Helix 3
AA3
A
74 84Right-handed alpha
Helix 4
AA4
A
107 119Right-handed alpha
Helix 5
AA5
A
128 133Right-handed alpha
Helix 6
AA6
A
136 143Right-handed alpha
Helix 7
AA7
A
144 146Right-handed 310
Helix 8
AA8
A
178 188Right-handed alpha
Helix 9
AA9
A
214 227Right-handed alpha
Helix 10
AB1
A
228 233Right-handed alpha
Helix 11
AB2
A
262 274Right-handed alpha
Helix 12
AB3
A
302 307Right-handed alpha
Helix 13
AB4
A
320 330Right-handed alpha
Helix 14
AB5
A
339 342Right-handed 310
Helix 15
AB6
A
343 358Right-handed alpha
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There are 3 sheets in PDB entry 29ZE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
122 125anti-parallel
Strand 3
A
88 91parallel
Strand 4
A
66 70parallel
Strand 5
A
363 366parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 157first strand
Strand 2
A
244 261anti-parallel
Strand 3
A
291 297anti-parallel
Strand 4
A
313 316parallel
Strand 5
A
333 336parallel
Strand 6
A
279 281anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 201first strand
Strand 2
A
204 213anti-parallel
Strand 3
A
167 174anti-parallel
Strand 4
A
236 239anti-parallel
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