Analysis of interatomic Contacts of Structural Units in PDB entry:
2A07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2A07 entry

There are 10 chains in PDB entry 2A07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 A 1 T 21
B
 T 1 G 21
C
 A 1 T 21
D
 T 1 G 21
F
 VAL 503ARG 584
G
 PRO 506ARG 584
H
 PRO 506ARG 584
I
 VAL 503ARG 583
J
 ILE 502ARG 584
K
 ILE 502ARG 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2A07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
F
508 520Right-handed alpha
Helix 2
2
F
526 542Right-handed alpha
Helix 3
3
F
544 559Right-handed alpha
Helix 4
4
F
576 584Right-handed alpha
Helix 5
5
G
508 520Right-handed alpha
Helix 6
6
G
521 524Right-handed 310
Helix 7
7
G
526 544Right-handed alpha
Helix 8
8
G
547 559Right-handed alpha
Helix 9
9
G
576 584Right-handed alpha
Helix 10
10
H
508 519Right-handed alpha
Helix 11
11
H
526 544Right-handed alpha
Helix 12
12
H
547 559Right-handed alpha
Helix 13
13
H
576 581Right-handed alpha
Helix 14
14
I
508 519Right-handed alpha
Helix 15
15
I
526 542Right-handed alpha
Helix 16
16
I
544 559Right-handed alpha
Helix 17
17
I
576 582Right-handed alpha
Helix 18
18
J
508 520Right-handed alpha
Helix 19
19
J
526 538Right-handed alpha
Helix 20
20
J
539 543Right-handed 310
Helix 21
21
J
544 559Right-handed alpha
Helix 22
22
J
576 582Right-handed alpha
Helix 23
23
K
508 520Right-handed alpha
Helix 24
24
K
526 538Right-handed alpha
Helix 25
25
K
539 543Right-handed 310
Helix 26
26
K
544 559Right-handed alpha
Helix 27
27
K
576 582Right-handed alpha
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There are 6 sheets in PDB entry 2A07. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
565 566first strand
Strand 2
F
571 572anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
562 566first strand
Strand 2
G
571 575anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
562 566first strand
Strand 2
H
571 575anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
562 565first strand
Strand 2
I
572 575anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
562 567first strand
Strand 2
J
570 575anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
562 567first strand
Strand 2
K
570 575anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il