Analysis of interatomic Contacts of Structural Units in PDB entry:
2A2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2A2Z entry

There are 4 chains in PDB entry 2A2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 20LEU 260
B
ARG 20LEU 260
C
ARG 20LEU 260
D
ARG 20LEU 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 2A2Z. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
33 43Right-handed alpha
Helix 2
2
A
54 59Right-handed alpha
Helix 3
3
A
80 88Right-handed alpha
Helix 4
4
A
88 112Right-handed alpha
Helix 5
5
A
129 136Right-handed alpha
Helix 6
6
A
136 144Right-handed alpha
Helix 7
7
A
148 165Right-handed alpha
Helix 8
8
A
167 171Right-handed 310
Helix 9
9
A
181 193Right-handed alpha
Helix 10
10
A
201 217Right-handed alpha
Helix 11
11
A
225 231Right-handed 310
Helix 12
12
A
246 259Right-handed alpha
Helix 13
13
B
33 43Right-handed alpha
Helix 14
14
B
54 60Right-handed alpha
Helix 15
15
B
80 88Right-handed alpha
Helix 16
16
B
88 113Right-handed alpha
Helix 17
17
B
129 136Right-handed alpha
Helix 18
18
B
136 144Right-handed alpha
Helix 19
19
B
148 165Right-handed alpha
Helix 20
20
B
181 193Right-handed alpha
Helix 21
21
B
201 217Right-handed alpha
Helix 22
22
B
246 259Right-handed alpha
Helix 23
23
C
33 42Right-handed alpha
Helix 24
24
C
54 59Right-handed alpha
Helix 25
25
C
80 88Right-handed alpha
Helix 26
26
C
88 112Right-handed alpha
Helix 27
27
C
129 136Right-handed alpha
Helix 28
28
C
136 144Right-handed alpha
Helix 29
29
C
148 167Right-handed alpha
Helix 30
30
C
181 193Right-handed alpha
Helix 31
31
C
201 217Right-handed alpha
Helix 32
32
C
225 230Right-handed 310
Helix 33
33
C
246 259Right-handed alpha
Helix 34
34
D
33 43Right-handed alpha
Helix 35
35
D
55 60Right-handed alpha
Helix 36
36
D
80 88Right-handed alpha
Helix 37
37
D
88 113Right-handed alpha
Helix 38
38
D
129 136Right-handed alpha
Helix 39
39
D
136 144Right-handed alpha
Helix 40
40
D
148 165Right-handed alpha
Helix 41
41
D
166 169Right-handed 310
Helix 42
42
D
181 193Right-handed alpha
Helix 43
43
D
201 217Right-handed alpha
Helix 44
44
D
246 259Right-handed alpha
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There are 4 sheets in PDB entry 2A2Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 51first strand
Strand 2
A
123 127parallel
Strand 3
A
22 27parallel
Strand 4
A
174 179parallel
Strand 5
A
233 237parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
48 51first strand
Strand 2
B
123 127parallel
Strand 3
B
22 27parallel
Strand 4
B
174 179parallel
Strand 5
B
233 237parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 51first strand
Strand 2
C
123 127parallel
Strand 3
C
22 27parallel
Strand 4
C
174 179parallel
Strand 5
C
233 237parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
48 51first strand
Strand 2
D
123 127parallel
Strand 3
D
22 27parallel
Strand 4
D
174 179parallel
Strand 5
D
233 237parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il