Analysis of interatomic Contacts of Structural Units in PDB entry:
2A5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2A5Z entry

There are 3 chains in PDB entry 2A5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 24VAL 262
B
 THR 24VAL 262
C
 PRO 19VAL 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 2A5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 39Right-handed alpha
Helix 2
2
A
108 112Right-handed 310
Helix 3
3
A
113 117Right-handed 310
Helix 4
4
B
30 39Right-handed alpha
Helix 5
5
B
108 112Right-handed 310
Helix 6
6
B
113 117Right-handed 310
Helix 7
7
C
30 39Right-handed alpha
Helix 8
8
C
113 117Right-handed 310
Back to top of page

There are 14 sheets in PDB entry 2A5Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
245 254anti-parallel
Strand 3
A
119 125anti-parallel
Strand 4
A
184 191anti-parallel
Strand 5
A
197 203anti-parallel
Strand 6
A
208 213anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
68 73anti-parallel
Strand 3
A
102 107anti-parallel
Strand 4
A
226 234anti-parallel
Strand 5
A
134 142anti-parallel
Strand 6
A
150 156anti-parallel
Strand 7
A
159 166anti-parallel
Strand 8
A
169 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
93 94anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
87 90anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 53first strand
Strand 2
B
245 254anti-parallel
Strand 3
B
119 125anti-parallel
Strand 4
B
184 191anti-parallel
Strand 5
B
197 203anti-parallel
Strand 6
B
208 213anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
68 73anti-parallel
Strand 3
B
102 107anti-parallel
Strand 4
B
226 234anti-parallel
Strand 5
B
134 142anti-parallel
Strand 6
B
150 156anti-parallel
Strand 7
B
159 166anti-parallel
Strand 8
B
169 173anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
68 73anti-parallel
Strand 3
B
102 107anti-parallel
Strand 4
B
226 234anti-parallel
Strand 5
B
134 142anti-parallel
Strand 6
B
150 156anti-parallel
Strand 7
B
159 166anti-parallel
Strand 8
B
177 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 78first strand
Strand 2
B
93 94anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
87 90anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 53first strand
Strand 2
C
245 254anti-parallel
Strand 3
C
119 125anti-parallel
Strand 4
C
184 191anti-parallel
Strand 5
C
197 203anti-parallel
Strand 6
C
208 213anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
68 73anti-parallel
Strand 3
C
102 107anti-parallel
Strand 4
C
226 234anti-parallel
Strand 5
C
134 142anti-parallel
Strand 6
C
150 156anti-parallel
Strand 7
C
159 166anti-parallel
Strand 8
C
169 173anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 65first strand
Strand 2
C
68 73anti-parallel
Strand 3
C
102 107anti-parallel
Strand 4
C
226 234anti-parallel
Strand 5
C
134 142anti-parallel
Strand 6
C
150 156anti-parallel
Strand 7
C
159 166anti-parallel
Strand 8
C
177 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
C
93 94anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 84first strand
Strand 2
C
87 90anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il