Analysis of interatomic Contacts of Structural Units in PDB entry:
2A70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2A70 entry

There are 2 chains in PDB entry 2A70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6VAL 227
B
 GLY 6VAL 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2A70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 17Right-handed 310
Helix 2
2
A
143 147Right-handed alpha
Helix 3
3
B
14 17Right-handed 310
Helix 4
4
B
143 147Right-handed alpha
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There are 4 sheets in PDB entry 2A70. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
53 58anti-parallel
Strand 3
A
198 205anti-parallel
Strand 4
A
86 93anti-parallel
Strand 5
A
111 118anti-parallel
Strand 6
A
126 133anti-parallel
Strand 7
A
149 152anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
43 45anti-parallel
Strand 3
A
215 225anti-parallel
Strand 4
A
68 77anti-parallel
Strand 5
A
162 169anti-parallel
Strand 6
A
175 180anti-parallel
Strand 7
A
183 188anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 35first strand
Strand 2
B
53 58anti-parallel
Strand 3
B
198 205anti-parallel
Strand 4
B
86 93anti-parallel
Strand 5
B
111 118anti-parallel
Strand 6
B
126 133anti-parallel
Strand 7
B
149 152anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
43 45anti-parallel
Strand 3
B
215 225anti-parallel
Strand 4
B
68 77anti-parallel
Strand 5
B
162 169anti-parallel
Strand 6
B
175 180anti-parallel
Strand 7
B
183 188anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il