Analysis of interatomic Contacts of Structural Units in PDB entry:
2A8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2A8E entry

There is 1 chain in PDB entry 2A8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLN 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2A8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
13 16Right-handed 310
Helix 3
3
A
18 27Right-handed alpha
Helix 4
4
A
29 50Right-handed alpha
Helix 5
5
A
109 120Right-handed alpha
Helix 6
6
A
120 128Right-handed alpha
Helix 7
7
A
147 149Right-handed 310
Helix 8
8
A
150 164Right-handed alpha
Helix 9
9
A
177 183Right-handed alpha
Helix 10
10
A
184 210Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2A8E.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
71 76anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
96 103anti-parallel
Strand 5
A
169 176anti-parallel
Strand 6
A
133 135anti-parallel
Strand 7
A
144 145anti-parallel
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