Analysis of interatomic Contacts of Structural Units in PDB entry:
2AE1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AE1 entry

There is 1 chain in PDB entry 2AE1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2AE1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
B
A
20 31Right-handed alpha
Helix 2
C
A
43 55Right-handed alpha
Helix 3
D
A
70 83Right-handed alpha
Helix 4
T0
A
103 105Right-handed 310
Helix 5
E1
A
108 118Right-handed alpha
Helix 6
E2
A
120 134Right-handed alpha
Helix 7
T1
A
147 149Right-handed 310
Helix 8
F1
A
157 176Right-handed alpha
Helix 9
F2
A
178 180Right-handed 310
Helix 10
GP
A
204 215Right-handed alpha
Helix 11
G
A
225 236Right-handed alpha
Helix 12
T2
A
238 240Right-handed 310
Helix 13
T3
A
254 256Right-handed 310
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There is 1 sheet ( S1) in PDB entry 2AE1.

There are 7 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
35 40parallel
Strand 3
A
11 15parallel
Strand 4
A
90 93parallel
Strand 5
A
139 144parallel
Strand 6
A
182 189parallel
Strand 7
A
247 250parallel
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